RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
CLN8-212ENST00000637083 GEMIN8Q9NWZ8 242 aaKnown RBP12.22□□□□□ -0.45
CLN8-212ENST00000637083 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
CLN8-212ENST00000637083 SSX2IPQ9Y2D8 614 aa12.22□□□□□ -0.45
CLN8-212ENST00000637083 LOC285095A0A1B0GVY8 99 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 MTMR11A4FU01 709 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 F5H5T6 163 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 ARVCFO00192 962 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 CNTN5O94779 1100 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 GNRH1P01148 92 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 FGF1P05230 155 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 CHRNGP07510 517 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 ANPEPP15144 967 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 MPSTP25325 297 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 OR1E1P30953 314 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 PPARGP37231 505 aaPredicted RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 SATB1Q01826 763 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 BTKQ06187 659 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 MSLNQ13421 630 aaPredicted RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 ZNF235Q14590 738 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 HERC3Q15034 1050 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 SH2D4BQ5SQS7 431 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 FAM45BPQ6NSW5 357 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 PGM2L1Q6PCE3 622 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 POU5F2Q8N7G0 328 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 FAM45AQ8TCE6 357 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 DTX3LQ8TDB6 740 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 TADA1Q96BN2 335 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 FEM1CQ96JP0 617 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 KLHL5Q96PQ7 755 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 SEPT5Q99719 369 aaPredicted RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 LRCH1Q9Y2L9 728 aa12.21□□□□□ -0.45
CLN8-212ENST00000637083 NYNRINQ9P2P1 1898 aaKnown RBP12.21□□□□□ -0.45
CLN8-212ENST00000637083 A0A1W2PQ45 241 aaPredicted RBP12.21□□□□□ -0.46
CLN8-212ENST00000637083 A0A1W2PQY0 241 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 MROH6A6NGR9 719 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 MEI4A8MW99 385 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 ENPP3O14638 875 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.46
CLN8-212ENST00000637083 DSC2Q02487 901 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 GALNT1Q10472 559 aaPredicted RBP12.21□□□□□ -0.46
CLN8-212ENST00000637083 TRIM68Q6AZZ1 485 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 FUT10Q6P4F1 479 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 CNSTQ6PJW8 725 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 CCNYL1Q8N7R7 359 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 OR6P1Q8NGX9 317 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 HEXDCQ8WVB3 486 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 SEPT8Q92599 483 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 IGSF8Q969P0 613 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 UXTQ9UBK9 157 aaPredicted RBP12.21□□□□□ -0.46
CLN8-212ENST00000637083 CDH22Q9UJ99 828 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 VWA7Q9Y334 891 aa12.21□□□□□ -0.46
CLN8-212ENST00000637083 LOC100653049A0A140TA62 436 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 PRAMEF11O60813 436 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 KRT34O76011 436 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 MMP2P08253 660 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ZDHHC11BP0C7U3 371 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ITGAXP20702 1163 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TACR2P21452 398 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 C1QTNF8P60827 252 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 MAXP61244 160 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 PFKPQ01813 784 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 BLMHQ13867 455 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CSHL1Q14406 222 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 LSM12Q3MHD2 195 aaKnown RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 HECTD2Q5U5R9 776 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 LHX8Q68G74 356 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 MRNIPQ6NTE8 343 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 APLFQ8IW19 511 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 DEFB107AQ8IZN7 70 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 FBXW8Q8N3Y1 598 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CEP70Q8NHQ1 597 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ARRDC2Q8TBH0 407 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 MAPK15Q8TD08 544 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CLPTM1LQ96KA5 538 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 LENG8Q96PV6 779 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TRMOQ9BU70 441 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 MAGEH1Q9H213 219 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ZDHHC2Q9UIJ5 367 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 GRID2O43424 1007 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 ZBTB14O43829 449 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TLR5O60602 858 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 IPO13O94829 963 aaKnown RBP12.2□□□□□ -0.46
CLN8-212ENST00000637083 GLP2RO95838 553 aa12.2□□□□□ -0.46
CLN8-212ENST00000637083 TBX18O95935 607 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms