RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ORAI3Q9BRQ5 295 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 SLC17A9Q9BYT1 436 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 LACRTQ9GZZ8 138 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 DNAAF2Q9NVR5 837 aaKnown RBP17.19■□□□□ 0.34
LIN28B-202ENST00000635857 SNX11Q9Y5W9 270 aa17.19■□□□□ 0.34
LIN28B-202ENST00000635857 TSPAN11A1L157 253 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 DCDC2BA2VCK2 349 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 C3orf70A6NLC5 250 aaPredicted RBP17.18■□□□□ 0.34
LIN28B-202ENST00000635857 KRT86O43790 486 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 SOCS5O75159 536 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
LIN28B-202ENST00000635857 KRT10P13645 584 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 CCNB1P14635 433 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 TGM2P21980 687 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 CES1P23141 567 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 CCT8P50990 548 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 SUZ12Q15022 739 aaKnown RBP17.18■□□□□ 0.34
LIN28B-202ENST00000635857 UGP2Q16851 508 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 KIF19Q2TAC6 998 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 TMEM259Q4ZIN3 620 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 ERMP1Q7Z2K6 904 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 PEX26Q7Z412 305 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 NDUFAF2Q8N183 169 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 OXR1Q8N573 874 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 UBL4BQ8N7F7 174 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 OR2I1PQ8NGU4 316 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 KLHDC7BQ96G42 594 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 BRD8Q9H0E9 1235 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 SALL4Q9UJQ4 1053 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 AMFRQ9UKV5 643 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 ZFR2Q9UPR6 939 aaKnown RBP17.18■□□□□ 0.34
LIN28B-202ENST00000635857 ITM2BQ9Y287 266 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 SLCO1B1Q9Y6L6 691 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 DUSP10Q9Y6W6 482 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 DMXL1Q9Y485 3027 aa17.18■□□□□ 0.34
LIN28B-202ENST00000635857 A6NNZ2 444 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TLR4O00206 839 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 FPGTO14772 594 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 AREL1O15033 823 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 MUSKO15146 869 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 CST8O60676 142 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TM7SF2O76062 418 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 PEX11BO96011 259 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 CPP00450 1065 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TIMP2P16035 220 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 CTNNA1P35221 906 aaKnown RBP17.17■□□□□ 0.34
LIN28B-202ENST00000635857 CDKN2BP42772 138 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 NR2C2P49116 596 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 ARRB1P49407 418 aaPredicted RBP17.17■□□□□ 0.34
LIN28B-202ENST00000635857 RWDD2BP57060 319 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 MAXP61244 160 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 FAM193AP78312 1265 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 PPIDQ08752 370 aaKnown RBP17.17■□□□□ 0.34
LIN28B-202ENST00000635857 CACNA1EQ15878 2313 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 INAVAQ3KP66 663 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TEX26Q8N6G2 289 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 P3H4Q92791 437 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TRPM6Q9BX84 2022 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 FZD3Q9NPG1 666 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 TM7SF3Q9NS93 570 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 RBM22Q9NW64 420 aaKnown RBP eCLIP17.17■□□□□ 0.34
LIN28B-202ENST00000635857 ATP8A1Q9Y2Q0 1164 aa17.17■□□□□ 0.34
LIN28B-202ENST00000635857 IGLON5A6NGN9 336 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 C10orf142B7Z368 130 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 YKT6O15498 198 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PAK4O96013 591 aaPredicted RBP17.16■□□□□ 0.34
LIN28B-202ENST00000635857 ZNF883P0CG24 379 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 CTSKP43235 329 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 COPS2P61201 443 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PPP2R5EQ16537 467 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PTAR1Q7Z6K3 402 aaPredicted RBP17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PGBD5Q8N414 524 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 DENND6BQ8NEG7 585 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 MAML1Q92585 1016 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 LGMNQ99538 433 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 SEMA3CQ99985 751 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 FERMT1Q9BQL6 677 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 WRAP53Q9BUR4 548 aaKnown RBP17.16■□□□□ 0.34
LIN28B-202ENST00000635857 NOD2Q9HC29 1040 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PCDH12Q9NPG4 1184 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 SEPT10Q9P0V9 454 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 GGT7Q9UJ14 662 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 PCDHA3Q9Y5H8 950 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 TMEM131Q92545 1883 aa17.16■□□□□ 0.34
LIN28B-202ENST00000635857 hCG_1818297A0A087WSY0 165 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 A0A1W2PR77 199 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 MIF4GDA9UHW6 222 aaKnown RBP17.15■□□□□ 0.34
LIN28B-202ENST00000635857 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
LIN28B-202ENST00000635857 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
LIN28B-202ENST00000635857 MMP20O60882 483 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 CCDC175P0C221 793 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 ELFN1P0C7U0 828 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 THEGLP0DJG4 465 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 CR2P20023 1033 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 CSRP1P21291 193 aaKnown RBP17.15■□□□□ 0.34
LIN28B-202ENST00000635857 CTNNA2P26232 953 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 MARCKSL1P49006 195 aa17.15■□□□□ 0.34
LIN28B-202ENST00000635857 NOVA1P51513 510 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms