RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CDKL3Q8IVW4 592 aaPredicted RBP15.62■□□□□ 0.09
CLN6-211ENST00000635754 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLN6-211ENST00000635754 GPR161Q8N6U8 529 aaKnown RBP15.62■□□□□ 0.09
CLN6-211ENST00000635754 PDCD6IPQ8WUM4 868 aaKnown RBP15.62■□□□□ 0.09
CLN6-211ENST00000635754 HTR3CQ8WXA8 447 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 ECHDC3Q96DC8 303 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 TLR10Q9BXR5 811 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 VPS45Q9NRW7 570 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 TMEM74BQ9NUR3 256 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 PYCARDQ9ULZ3 195 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 JRKLQ9Y4A0 524 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 PCDHGC4Q9Y5F7 938 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 FADS3Q9Y5Q0 445 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 FAM186AA6NE01 2351 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 ZNF292O60281 2723 aa15.62■□□□□ 0.09
CLN6-211ENST00000635754 A0A1W2PPC4 97 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 LATO43561 262 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 TSPAN6O43657 245 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 RNGTTO60942 597 aaKnown RBP15.61■□□□□ 0.09
CLN6-211ENST00000635754 ZNF189O75820 626 aaPredicted RBP15.61■□□□□ 0.09
CLN6-211ENST00000635754 SERPINF2P08697 491 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 TIMP2P16035 220 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 CA4P22748 312 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 PTPN3P26045 913 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 CD27P26842 260 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 NUDT1P36639 197 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 POLR2LP62875 67 aaKnown RBP15.61■□□□□ 0.09
CLN6-211ENST00000635754 ELP6Q0PNE2 266 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 CSRP2Q16527 193 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 DUOXA1Q1HG43 343 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 TEX44Q53QW1 395 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 LRRC73Q5JTD7 316 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 KIAA1161Q6NSJ0 714 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 PRPF39Q86UA1 669 aaKnown RBP15.61■□□□□ 0.09
CLN6-211ENST00000635754 ZCCHC9Q8N567 271 aaKnown RBP15.61■□□□□ 0.09
CLN6-211ENST00000635754 CNTD1Q8N815 330 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 CEP76Q8TAP6 659 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 FEM1CQ96JP0 617 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 NSMCE3Q96MG7 304 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 AGAP3Q96P47 875 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 VAT1Q99536 393 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 SEMA4GQ9NTN9 838 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 ITM2BQ9Y287 266 aa15.61■□□□□ 0.09
CLN6-211ENST00000635754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLN6-211ENST00000635754 TRPM6Q9BX84 2022 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 A0A1W2PQU0 124 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 USP27XA6NNY8 438 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 C10orf142B7Z368 130 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 ENC1O14682 589 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 AREL1O15033 823 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 HTRA2O43464 458 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 FOXD2O60548 495 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 CPP00450 1065 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 ZNF806P0C7X5 589 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 RBP3P10745 1247 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 MAT2AP31153 395 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 RPS21P63220 83 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 TRAF2Q12933 501 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 SETMARQ53H47 684 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 ARMC12Q5T9G4 340 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 ERAP2Q6P179 960 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 DARS2Q6PI48 645 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 ZSCAN30Q86W11 494 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 HORMAD1Q86X24 394 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 ZSWIM9Q86XI8 627 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 SLC35F6Q8N357 371 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 ARRDC2Q8TBH0 407 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 TEKT5Q96M29 485 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 FAM118BQ9BPY3 351 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 GGT7Q9UJ14 662 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 PCDHB9Q9Y5E1 797 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 PI4KAP42356 2102 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 GVINP1Q7Z2Y8 2422 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 A0A1B0GTW7 788 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 TCRBV7S2A1N4TA0A589 114 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 PRR5-ARHGAP8B1AHC4 643 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 KHNYNO15037 678 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 BCAT2O15382 392 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 SPINT1O43278 529 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 STK10O94804 968 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 CFIP05156 583 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 NFKBIAP25963 317 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 RBL1P28749 1068 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 CD86P42081 329 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 NIPAL4Q0D2K0 466 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 WASHC5Q12768 1159 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 TRIM61Q5EBN2 209 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 SLC13A5Q86YT5 568 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 C12orf50Q8NA57 414 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 CXorf40AQ8TE69 158 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 NUSAP1Q9BXS6 441 aaKnown RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 SMOC1Q9H4F8 434 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 PARD6AQ9NPB6 346 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 PCDH12Q9NPG4 1184 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 KLHL8Q9P2G9 620 aaPredicted RBP15.6■□□□□ 0.09
CLN6-211ENST00000635754 TRHDEQ9UKU6 1024 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 DMTF1Q9Y222 760 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 RAI2Q9Y5P3 530 aa15.6■□□□□ 0.09
CLN6-211ENST00000635754 DOCK9Q9BZ29 2069 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms