RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 HS6ST2Q96MM7 605 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SLITRK1Q96PX8 696 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 EYA3Q99504 573 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 MAK16Q9BXY0 300 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 MUC13Q9H3R2 512 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 HCFC1R1Q9NWW0 138 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 KCND2Q9NZV8 630 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SLC25A10Q9UBX3 287 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 LIMA1Q9UHB6 759 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 CHORDC1Q9UHD1 332 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 PCDHB2Q9Y5E7 798 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 BLMP54132 1417 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 COL16A1Q07092 1604 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 GOLGA6L10A0A0M3HER8 536 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 NPIPB15A6NHN6 443 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 C3orf70A6NLC5 250 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 RTEL1-TNFRSF6BF6WH68 1400 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 M0QZQ0 153 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CLIC1O00299 241 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 TNFSF14O43557 240 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 TLX3O43711 291 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 TMPRSS11DO60235 418 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 PHLPP1O60346 1717 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 HNRNPCL1O60812 293 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 NDUFB8O95169 186 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 METTL18O95568 372 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ALDOAP04075 364 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 HOXB2P14652 356 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CREB1P16220 341 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ADRA1DP25100 572 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 TACR3P29371 465 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ABCD1P33897 745 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 NNMTP40261 264 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 HADHAP40939 763 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ALDH7A1P49419 539 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 TLE3Q04726 772 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 LRMPQ12912 555 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CDC16Q13042 620 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 KEAP1Q14145 624 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 RASA2Q15283 850 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 DUSP28Q4G0W2 176 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ZNF766Q5HY98 468 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CC2D1BQ5T0F9 858 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 GPR139Q6DWJ6 353 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 GRHL2Q6ISB3 625 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 WDR93Q6P2C0 686 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 C16orf89Q6UX73 402 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 RRM2BQ7LG56 351 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 MON1AQ86VX9 555 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 SPATA2LQ8IUW3 424 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 C16orf71Q8IYS4 520 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 IQCF1Q8N6M8 205 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.4□□□□□ -1.87
VPS8-228ENST00000628962 NKAIN3Q8N8D7 197 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CLEC4CQ8WTT0 213 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 SCFD2Q8WU76 684 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 NUDCD2Q8WVJ2 157 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 KCNJ9Q92806 393 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ATP6V1E2Q96A05 226 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 JAKMIP2Q96AA8 810 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CNDP2Q96KP4 475 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 NTPCRQ9BSD7 190 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 CTDSP1Q9GZU7 261 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 TLR8Q9NR97 1041 aaKnown RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 MRGBPQ9NV56 204 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 TMEM45AQ9NWC5 275 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ZDHHC7Q9NXF8 308 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 HCN3Q9P1Z3 774 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 MGAT4CQ9UBM8 478 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 CORO1CQ9ULV4 474 aaPredicted RBP3.4□□□□□ -1.87
VPS8-228ENST00000628962 OSGIN2Q9Y236 505 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 ZNF518AQ6AHZ1 1483 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 KDM3AQ9Y4C1 1321 aa3.4□□□□□ -1.87
VPS8-228ENST00000628962 KDM5DQ9BY66 1539 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 KDM5CP41229 1560 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 TEX13CA0A0J9YWL9 993 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 FAM90A7PA6NKC0 464 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 C2CD4BA6NLJ0 364 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 FAM90A22PA8MWA6 464 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 FAM90A12PA8MX19 464 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 FAM90A23PA8MXZ1 464 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 TNFRSF13BO14836 293 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 SYN3O14994 580 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 INPPL1O15357 1258 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CA12O43570 354 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 GJB3O75712 270 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 SEC14L2O76054 403 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 BEST1O76090 585 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 PLGP00747 810 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 CYP3A4P08684 503 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 CLTBP09497 229 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 IGHMBP2P38935 993 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 EIF3BP55884 814 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 UFM1P61960 85 aa3.39□□□□□ -1.87
VPS8-228ENST00000628962 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 IFI35P80217 286 aaPredicted RBP3.39□□□□□ -1.87
VPS8-228ENST00000628962 TXNL4AP83876 142 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms