RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	GRM3	Q14832	879 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	LARS2	Q15031	903 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	RBMS2	Q15434	407 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	MAPKAPK3	Q16644	382 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	MOG	Q16653	247 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	MIDN	Q504T8	468 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	TMEM63B	Q5T3F8	832 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CLEC2A	Q6UVW9	174 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	B3GNT9	Q6UX72	402 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	RGS9BP	Q6ZS82	235 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CCDC149	Q6ZUS6	474 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	PTCHD4	Q6ZW05	846 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZDHHC17	Q8IUH5	632 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	TPH2	Q8IWU9	490 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CCDC33	Q8N5R6	958 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	MAB21L3	Q8N8X9	362 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	SLC4A11	Q8NBS3	891 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZBTB44	Q8NCP5	570 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	OR6B3	Q8NGW1	331 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	TMEM171	Q8WVE6	324 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	DYDC1	Q8WWB3	177 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CCT6B	Q92526	530 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	KIFAP3	Q92845	792 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	FAM149B1	Q96BN6	582 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	SPDL1	Q96EA4	605 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CDCA5	Q96FF9	252 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ABHD8	Q96I13	439 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZNF845	Q96IR2	970 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	VPS39	Q96JC1	886 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	RPGRIP1	Q96KN7	1286 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	FAM20A	Q96MK3	541 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	PIGS	Q96S52	555 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	DDX50	Q9BQ39	737 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	JPH2	Q9BR39	696 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	DRC3	Q9H069	523 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	INTS2	Q9H0H0	1204 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	NT5C3A	Q9H0P0	336 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	SIL1	Q9H173	461 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	EBF3	Q9H4W6	596 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZMAT3	Q9HA38	289 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	NMRK2	Q9NPI5	230 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	XPNPEP3	Q9NQH7	507 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	VPS45	Q9NRW7	570 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	IARS2	Q9NSE4	1012 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	INTS10	Q9NVR2	710 aa	Known RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	DACT1	Q9NYF0	836 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CRYL1	Q9Y2S2	319 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	PCDHGB5	Q9Y5G0	923 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	CCDC171	Q6TFL3	1326 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	WDR19	Q8NEZ3	1342 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	NSD2	O96028	1365 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	RPAP1	Q9BWH6	1393 aa	Predicted RBP	3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	TNIK	Q9UKE5	1360 aa		3.88	□□□□□ -1.79
UBE2A-208	ENST00000628734	ERICH2	A1L162	156 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	FAM90A10P	A6NDY2	464 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	RRN3P2	A6NIE6	340 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	GOLGA8J	A6NMD2	632 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	GOLGA8T	H3BQL2	631 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	WDR46	O15213	610 aa	Known RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	CCNT1	O60563	726 aa	Known RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	ZC3H11A	O75152	810 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	CNOT3	O75175	753 aa	Known RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TACC1	O75410	805 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	GCAT	O75600	419 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TMCC1	O94876	653 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TRIM16	O95361	564 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	ECD	O95905	644 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	APOA4	P06727	396 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TMEM191B	P0C7N4	346 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	POLR2M	P0CAP2	368 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	GOLGA8H	P0CJ92	632 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	ACTN1	P12814	892 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PRF1	P14222	555 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	HSPA6	P17066	643 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	ARF4	P18085	180 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	EN2	P19622	333 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	JAK1	P23458	1154 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	IL32	P24001	234 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	HOXD9	P28356	352 aa	Predicted RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	GDI1	P31150	447 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TRIM23	P36406	574 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PPP1R2	P41236	205 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	THOP1	P52888	689 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	VCP	P55072	806 aa	Known RBP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	SLC26A5	P58743	744 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	OLR1	P78380	273 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	TIAL1	Q01085	375 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	CFHR1	Q03591	330 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	SLC13A2	Q13183	592 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	CUL1	Q13616	776 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	BCL2A1	Q16548	175 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PTCHD3	Q3KNS1	767 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PM20D1	Q6GTS8	502 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	PPP1R2P3	Q6NXS1	205 aa		3.87	□□□□□ -1.79
UBE2A-208	ENST00000628734	WDR73	Q6P4I2	378 aa		3.87	□□□□□ -1.79

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