RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 BUB1O43683 1085 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CEACAM1P13688 526 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 GLDCP23378 1020 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CASP14P31944 242 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 HTR7P34969 479 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 NUDT1P36639 197 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 PBX1P40424 430 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 GRIA4P48058 902 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 SERPINH1P50454 418 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 CCR5P51681 352 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 TPI1P60174 286 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 SNRPD1P62314 119 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 RACK1P63244 317 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 CNTN1Q12860 1018 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 GRIK2Q13002 908 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 SLC14A1Q13336 389 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 HNRNPDQ14103 355 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 TRIM14Q14142 442 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 ACAP1Q15027 740 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 POM121L1PQ3SYA9 428 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CARD16Q5EG05 197 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CCDC122Q5T0U0 273 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 FAM72AQ5TYM5 149 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 MANEALQ5VSG8 457 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 FAM72DQ6L9T8 149 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 C22orf39Q6P5X5 142 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 FAM72BQ86X60 149 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 FAM20CQ8IXL6 584 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 PYROXD2Q8N2H3 581 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 AADATQ8N5Z0 425 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 PCDH20Q8N6Y1 951 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 RTL3Q8N8U3 475 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 TMEM102Q8N9M5 508 aaPredicted RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 DEFB124Q8NES8 71 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 OR2A12Q8NGT7 310 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 ARHGEF2Q92974 986 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 SERAC1Q96JX3 654 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 EIF3CQ99613 913 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 HEPHQ9BQS7 1158 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 SYT11Q9BT88 431 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 XPO4Q9C0E2 1151 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 TTYH3Q9C0H2 523 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 ISCUQ9H1K1 167 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 TNKS2Q9H2K2 1166 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 DEF6Q9H4E7 631 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 DHX35Q9H5Z1 703 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 GAREM1Q9H706 876 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 TM9SF3Q9HD45 589 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 OSGEPQ9NPF4 335 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 HECAQ9UBI9 543 aaPredicted RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 SERGEFQ9UGK8 458 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 PCSK1NQ9UHG2 260 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 SARDHQ9UL12 918 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 ANKRD6Q9Y2G4 727 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 RALGAPA1Q6GYQ0 2036 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 GVINP1Q7Z2Y8 2422 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 DMDP11532 3685 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 MYO18AQ92614 2054 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 A0A1B0GVT2 93 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ARHGAP42A6NI28 874 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PLK4O00444 970 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 KRIT1O00522 736 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 EREGO14944 169 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 GSC2O15499 205 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PLRG1O43660 514 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 KDELR3O43731 214 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 DFNA5O60443 496 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 MAGEC1O60732 1142 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 LEFTY1O75610 366 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ZMPSTE24O75844 475 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PCDH8O95206 1070 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 GSRP00390 522 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 IGHV4-34P06331 123 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ADRB1P08588 477 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 CD38P28907 300 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ACVRL1P37023 503 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ARL4AP40617 200 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 SSR1P43307 286 aaKnown RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 PREPP48147 710 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 ZNF135P52742 658 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 ADPRHP54922 357 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 YBEYP58557 167 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 ARF5P84085 180 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 OGDHQ02218 1023 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 SEMA3BQ13214 749 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PIGHQ14442 188 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 STAT4Q14765 748 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 HLA-BQ31612 363 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PARP15Q460N3 678 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 SETMARQ53H47 684 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 BOLA3Q53S33 107 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 PPP6R3Q5H9R7 873 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
TCF4-249ENST00000625716 N4BP2L1Q5TBK1 243 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
TCF4-249ENST00000625716 SPECC1LQ69YQ0 1117 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms