RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 C1QTNF8P60827 252 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 MRPS6P82932 125 aaKnown RBP11.35□□□□□ -0.59
VARS2-213ENST00000625423 CDKL1Q00532 357 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
VARS2-213ENST00000625423 FAM83EQ2M2I3 478 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 TECRLQ5HYJ1 363 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 PTAR1Q7Z6K3 402 aaPredicted RBP11.35□□□□□ -0.59
VARS2-213ENST00000625423 CCDC117Q8IWD4 279 aaPredicted RBP11.35□□□□□ -0.59
VARS2-213ENST00000625423 CASP10Q92851 521 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 ACBD6Q9BR61 282 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 PCDHAC1Q9H158 963 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 VCX3AQ9NNX9 186 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
VARS2-213ENST00000625423 MYOCOSA0A1B0GUC4 107 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 A0A1B0GVG6 124 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 SMIM31A0A1B0GVY4 71 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 E7ENX8 843 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 M0QZ92 97 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 CCDC166P0CW27 439 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 CCR1P32246 355 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 WNT3AP56704 352 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 ARTNQ5T4W7 220 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 MANEALQ5VSG8 457 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 IYDQ6PHW0 289 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 C14orf80Q86SX3 495 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 LZTR1Q8N653 840 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 OR10T2Q8NGX3 314 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 FGF10O15520 208 aaPredicted RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 IPO13O94829 963 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 CLPTM1O96005 669 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 TFAP2AP05549 437 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 HOXC13P31276 330 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 HUNKP57058 714 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 PFKPQ01813 784 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 DYNC1I2Q13409 638 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 AGKQ53H12 422 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 BRMS1LQ5PSV4 323 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 CUZD1Q86UP6 607 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 METTL23Q86XA0 190 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 TMEM102Q8N9M5 508 aaPredicted RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 KATNAL1Q9BW62 490 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 UBDO15205 165 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 RTN3O95197 1032 aaPredicted RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 MT-CO1P00395 513 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 ATP6V1B1P15313 513 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 PURAQ00577 322 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 MYBPC1Q00872 1141 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 RALGDSQ12967 914 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 AGAP9Q5VTM2 703 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 TIGD7Q6NT04 549 aaPredicted RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 PAOXQ6QHF9 649 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 CHSY3Q70JA7 882 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 ASB9Q96DX5 294 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 PRKD2Q9BZL6 878 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 SEMA6AQ9H2E6 1030 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 ABCC13Q9NSE7 274 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 CACNA2D2Q9NY47 1150 aa11.34□□□□□ -0.59
VARS2-213ENST00000625423 UTP6Q9NYH9 597 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 IPO11Q9UI26 975 aaKnown RBP11.34□□□□□ -0.59
VARS2-213ENST00000625423 E9PAM4 449 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 PSMD12O00232 456 aaPredicted RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 CCL22O00626 93 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 FBP2O00757 339 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LTA4HP09960 611 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 TSPAN8P19075 237 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 HOXC8P31273 242 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 RPL5P46777 297 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 SLC5A3P53794 718 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 MAXP61244 160 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 ITKQ08881 620 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LSAMPQ13449 338 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 TRIM25Q14258 630 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 FASTKQ14296 549 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 FSCN1Q16658 493 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 SLC5A9Q2M3M2 681 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 MORN1Q5T089 497 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 REP15Q6BDI9 236 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 TAF2Q6P1X5 1199 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LDB1Q86U70 411 aaPredicted RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 ANKRD49Q8WVL7 239 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 MEAF6Q9HAF1 191 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 EPS15L1Q9UBC2 864 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 GIT1Q9Y2X7 761 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 HS3ST4Q9Y661 456 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 GPC4O75487 556 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 STX5Q13190 355 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 LRP8Q14114 963 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 KLC3Q6P597 504 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 SCML4Q8N228 414 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 PKMYT1Q99640 499 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 EML4Q9HC35 981 aaKnown RBP11.33□□□□□ -0.6
VARS2-213ENST00000625423 TBC1D13Q9NVG8 400 aa11.33□□□□□ -0.6
VARS2-213ENST00000625423 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms