RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TMEM110-MUSTN1A8MSY1 372 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 AREL1O15033 823 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 TNFP01375 233 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 PAEPP09466 180 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 ITIH2P19823 946 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 MPSTP25325 297 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 CD1CP29017 333 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 ALDH4A1P30038 563 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 CCR1P32246 355 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 PSMC2P35998 433 aaKnown RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 COPB1P53618 953 aaKnown RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 LIMK2P53671 638 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 STK38Q15208 465 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 TAF5Q15542 800 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 CBWD6Q4V339 395 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 CRTC2Q53ET0 693 aaPredicted RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 CBWD3Q5JTY5 395 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 CBWD5Q5RIA9 395 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 DCAF12Q5T6F0 453 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 SPECC1LQ69YQ0 1117 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 TMEM270Q6UE05 265 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 FAM129CQ86XR2 697 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 PCDH20Q8N6Y1 951 aaKnown RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 OR7D4Q8NG98 312 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 OR6K2Q8NGY2 324 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 RTP4Q96DX8 246 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 DPEP2Q9H4A9 486 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 EXOC1Q9NV70 894 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 DDIT4Q9NX09 232 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 MTMR6Q9Y217 621 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 FCF1Q9Y324 198 aaKnown RBP14.04□□□□□ -0.16
SNX1-214ENST00000625244 OR1A2Q9Y585 309 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 ACTL7AQ9Y615 435 aa14.04□□□□□ -0.16
SNX1-214ENST00000625244 B4E171 279 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 ZMPSTE24O75844 475 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 ADCY5O95622 1261 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 SLC2A3P11169 496 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 F8A1P23610 371 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 HTR1BP28222 390 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX1-214ENST00000625244 TSPAN7P41732 249 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 SERPINH1P50454 418 aaKnown RBP14.03□□□□□ -0.16
SNX1-214ENST00000625244 MAZP56270 477 aaKnown RBP14.03□□□□□ -0.16
SNX1-214ENST00000625244 YWHAEP62258 255 aaKnown RBP14.03□□□□□ -0.16
SNX1-214ENST00000625244 YWHAZP63104 245 aaKnown RBP14.03□□□□□ -0.16
SNX1-214ENST00000625244 ABHD18Q0P651 414 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 TRA2AQ13595 282 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■■□□□ 12.9
SNX1-214ENST00000625244 NFIL3Q16649 462 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 WSCD2Q2TBF2 565 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 ZNF805Q5CZA5 627 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 NKAIN2Q5VXU1 208 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 FOXR2Q6PJQ5 311 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 NRSN1Q8IZ57 195 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 APOOQ9BUR5 198 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 C1QTNF7Q9BXJ2 289 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 TM6SF2Q9BZW4 377 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 CEP44Q9C0F1 390 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 INTS2Q9H0H0 1204 aaKnown RBP14.03□□□□□ -0.16
SNX1-214ENST00000625244 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 DGKBQ9Y6T7 804 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 LRP4O75096 1905 aa14.03□□□□□ -0.16
SNX1-214ENST00000625244 RFPL1O75677 317 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 FURINP09958 794 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.17
SNX1-214ENST00000625244 THRAP10827 490 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 GPD2P43304 727 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 RAB15P59190 212 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 LRMPQ12912 555 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 ADAM9Q13443 819 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 INPP5AQ14642 412 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 CLPPQ16740 277 aaPredicted RBP14.02□□□□□ -0.17
SNX1-214ENST00000625244 PRR30Q53SZ7 412 aaPredicted RBP14.02□□□□□ -0.17
SNX1-214ENST00000625244 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 TMEM135Q86UB9 458 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 IRF2BP1Q8IU81 584 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 BMPERQ8N8U9 685 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 CXorf40AQ8TE69 158 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 OR1E3Q8WZA6 343 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 ARHGEF26Q96DR7 871 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 CTRCQ99895 268 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 WRAP53Q9BUR4 548 aaKnown RBP14.02□□□□□ -0.17
SNX1-214ENST00000625244 TRIM62Q9BVG3 475 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 SIK2Q9H0K1 926 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 TMEM9Q9P0T7 183 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 SNX10Q9Y5X0 201 aa14.02□□□□□ -0.17
SNX1-214ENST00000625244 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.17
SNX1-214ENST00000625244 PAGE1O75459 146 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 SORBS2O94875 1100 aaKnown RBP14.01□□□□□ -0.17
SNX1-214ENST00000625244 UGT2B4P06133 528 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 CSF2RBP32927 897 aa14.01□□□□□ -0.17
SNX1-214ENST00000625244 ARF5P84085 180 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms