RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NPC1O15118 1278 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 ALOX15BO15296 676 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 SOCS5O75159 536 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 SIN3BO75182 1162 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 CPP00450 1065 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 PRLP01236 227 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 FGF1P05230 155 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 EPHX1P07099 455 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 PDHA1P08559 390 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 CD72P21854 359 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 ELK3P41970 407 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 WASP42768 502 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 NPY2RP49146 381 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 PMS2P54278 862 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 CRADDP78560 199 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 C2orf27AQ580R0 203 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 CERCAMQ5T4B2 595 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 C9orf64Q5T6V5 341 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 ARMC12Q5T9G4 340 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 DENND2CQ68D51 928 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 CASC4Q6P4E1 433 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 AGGF1Q8N302 714 aaeCLIP17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 MPP5Q8N3R9 675 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 LPCAT1Q8NF37 534 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 PYROXD1Q8WU10 500 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 C9orf72Q96LT7 481 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 SUN2Q9UH99 717 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 IL36AQ9UHA7 158 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 PCDHB9Q9Y5E1 797 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 MAD1L1Q9Y6D9 718 aa17.96■□□□□ 0.47
PTCHD3-202ENST00000622555 SHISA7A6NL88 538 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 TRAFD1O14545 582 aaPredicted RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 HTRA2O43464 458 aaPredicted RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 PGLSO95336 258 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 UGT2B4P06133 528 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 BMP1P13497 986 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 GABPB1Q06547 395 aaPredicted RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 CCDC38Q502W7 563 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 RELL1Q8IUW5 271 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 STK40Q8N2I9 435 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 FBXO36Q8NEA4 188 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 LRRC39Q96DD0 335 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 SIGLEC10Q96LC7 697 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ASB2Q96Q27 587 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 WDR83Q9BRX9 315 aaKnown RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 CDC42EP4Q9H3Q1 356 aaKnown RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 SEMA4AQ9H3S1 761 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ARHGEF3Q9NR81 526 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 SYBUQ9NX95 663 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 FBXL21Q9UKT6 434 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 NDRG2Q9UN36 371 aaKnown RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 TEX264Q9Y6I9 313 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 WASF2Q9Y6W5 498 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 LEFTY1O75610 366 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 EPHB1P54762 984 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 CBLBQ13191 982 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ENPP2Q13822 863 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ARSIQ5FYB1 569 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 CFAP58Q5T655 872 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 GDPD4Q6W3E5 623 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ZNF852Q6ZMS4 543 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 IGDCC3Q8IVU1 814 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 KCNV2Q8TDN2 545 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 UBLCP1Q8WVY7 318 aaPredicted RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 OR8D1Q8WZ84 308 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 VOPP1Q96AW1 172 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ERLEC1Q96DZ1 483 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 ZNF641Q96N77 438 aaPredicted RBP17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 IL22Q9GZX6 179 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 SAMD15Q9P1V8 674 aa17.95■□□□□ 0.46
PTCHD3-202ENST00000622555 FZD6O60353 706 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 CTSLP07711 333 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 ELAVL3Q14576 367 aaKnown RBP17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 POU6F1Q14863 301 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 KYNUQ16719 465 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 SDE2Q6IQ49 451 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 TRMT10CQ7L0Y3 403 aaKnown RBP17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 MREGQ8N565 214 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 STAMBPL1Q96FJ0 436 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 LRIG1Q96JA1 1093 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 KLHL32Q96NJ5 620 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 EBNA1BP2Q99848 306 aaKnown RBP17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 PRSS16Q9NQE7 514 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 NINJ2Q9NZG7 142 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 WNT16Q9UBV4 365 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 ZC3H7BQ9UGR2 993 aaKnown RBP17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 COL6A3P12111 3177 aa17.94■□□□□ 0.46
PTCHD3-202ENST00000622555 KLF8O95600 359 aaPredicted RBP17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 PRNPP04156 253 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 CHRM1P11229 460 aaPredicted RBP17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 ALADP13716 330 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 NTSR1P30989 418 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 RPL26P61254 145 aaKnown RBP17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 PRKCQQ04759 706 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 SEPT6Q14141 434 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 FBXO43Q4G163 708 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 CAPN12Q6ZSI9 719 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms