RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 DNAJC24Q6P3W2 148 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 PCSK4Q6UW60 755 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 MACC1Q6ZN28 852 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 PHF13Q86YI8 300 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-227ENST00000622057 HID1Q8IV36 788 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 ZNF843Q8N446 348 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 C3orf20Q8ND61 904 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 SLC46A1Q96NT5 459 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 AGPAT1Q99943 283 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 CCDC3Q9BQI4 270 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.42□□□□□ -0.9
TARDBP-227ENST00000622057 LRRC61Q9BV99 259 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 DPH1Q9BZG8 443 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 ASCL3Q9NQ33 180 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 SIRPGQ9P1W8 387 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 FZD10Q9ULW2 581 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 TRPM6Q9BX84 2022 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 SHROOM3Q8TF72 1996 aa9.42□□□□□ -0.9
TARDBP-227ENST00000622057 FASNP49327 2511 aaKnown RBP9.42□□□□□ -0.9
TARDBP-227ENST00000622057 PMS2P1A4D2B8 440 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 WASH4PA8MWX3 477 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 J3KR12 359 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ERVH48-1M5A8F1 160 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 TOR1BO14657 336 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 TCEA3O75764 348 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 TNFSF15O95150 251 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 TNFP01375 233 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PRKCGP05129 697 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PCCBP05166 539 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 C6P13671 934 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 CDK11BP21127 795 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 HTR1BP28222 390 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PEX5P50542 639 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ZNF143P52747 638 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 HK3P52790 923 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 UCNP55089 124 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 GSCP56915 257 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 RPL7AP62424 266 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 UBXN1Q04323 297 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ELP6Q0PNE2 266 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 SERINC3Q13530 473 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 SPIDRQ14159 915 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 INPP5AQ14642 412 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 IRF4Q15306 451 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ELOCQ15369 112 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 UGP2Q16851 508 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 WSCD2Q2TBF2 565 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 CFAP58Q5T655 872 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 CDKAL1Q5VV42 579 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ERAP2Q6P179 960 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ARL14Q8N4G2 192 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PAF1Q8N7H5 531 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 ANKRD20A12PQ8NF67 263 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 WDR36Q8NI36 951 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 NAT6Q93015 286 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 GRAMD1AQ96CP6 724 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PRR11Q96HE9 360 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 CELF6Q96J87 481 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 MCEEQ96PE7 176 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 APOOQ9BUR5 198 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 CPEB1Q9BZB8 566 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 EDEM3Q9BZQ6 932 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 DKK3Q9UBP4 350 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 LHX3Q9UBR4 397 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 UBA2Q9UBT2 640 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-227ENST00000622057 SIK3Q9Y2K2 1263 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 OR1A2Q9Y585 309 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 PCDHGA8Q9Y5G5 932 aa9.41□□□□□ -0.9
TARDBP-227ENST00000622057 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 TMEM110-MUSTN1A8MSY1 372 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 AGRPO00253 132 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 DAPK3O43293 454 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-227ENST00000622057 RASGRP1O95267 797 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 ALPIP09923 528 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 DESP17661 470 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 TNFAIP3P21580 790 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 LIG3P49916 1009 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 SUOXP51687 545 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 TPI1P60174 286 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 SRP54P61011 504 aaKnown RBP9.4□□□□□ -0.9
TARDBP-227ENST00000622057 CCL7P80098 99 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 RHDQ02161 417 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 VAC14Q08AM6 782 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 LY6DQ14210 128 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 ALG11Q2TAA5 492 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 PARP15Q460N3 678 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 ACAD10Q6JQN1 1059 aa9.4□□□□□ -0.9
TARDBP-227ENST00000622057 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms