RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 NTRK1P04629 796 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CES1P23141 567 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CDKN2BP42772 138 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 RASA2Q15283 850 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 FAM187BQ17R55 369 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 MAMDC4Q6UXC1 1216 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 KRT78Q8N1N4 520 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 POU5F2Q8N7G0 328 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TRPC4APQ8TEL6 797 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TMEM120AQ9BXJ8 343 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 IL1RAPL1Q9NZN1 696 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 H2AFY2Q9P0M6 372 aaPredicted RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 CD3EAPO15446 510 aaKnown RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 GSTM1P09488 218 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 POU1F1P28069 291 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 KCNQ1P51787 676 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CDH4P55283 916 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CDH13P55290 713 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CYLC2Q14093 348 aaPredicted RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 DLG2Q15700 870 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 ATXN7L2Q5T6C5 722 aaPredicted RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 LDB1Q86U70 411 aaPredicted RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 CRYBG2Q8N1P7 616 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CEP70Q8NHQ1 597 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 HMCESQ96FZ2 354 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CEP19Q96LK0 163 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CYP2S1Q96SQ9 504 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 ERVK-5Q9HDB9 667 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 CLIC5Q9NZA1 410 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 MAP10Q9P2G4 905 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 SLC27A6Q9Y2P4 619 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TNPO3Q9Y5L0 923 aaKnown RBP9.3□□□□□ -0.92
GGA3-223ENST00000621870 KCNE2Q9Y6J6 123 aa9.3□□□□□ -0.92
GGA3-223ENST00000621870 TCHHQ07283 1943 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 QSOX1O00391 747 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 IRAK2O43187 625 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 DCXO43602 365 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 SERPINI2O75830 405 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 GALTP07902 379 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 FSHRP23945 695 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PIK3CGP48736 1102 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 POLE2P56282 527 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CHRNB3Q05901 458 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PAGE2BQ5JRK9 111 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 FAM45BPQ6NSW5 357 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 FAM45AQ8TCE6 357 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 DIS3LQ8TF46 1054 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 C2orf15Q8WU43 125 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 CYGBQ8WWM9 190 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 ATL1Q8WXF7 558 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 FBXL18Q96ME1 805 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 RAD9AQ99638 391 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PTPN18Q99952 460 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 ACE2Q9BYF1 805 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 GPR88Q9GZN0 384 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 FAM83DQ9H4H8 585 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CHRAC1Q9NRG0 131 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 THAP1Q9NVV9 213 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 VWA7Q9Y334 891 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PCDHA11Q9Y5I1 949 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 WNT6Q9Y6F9 365 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 KPNA5O15131 536 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PEX11AO75192 247 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 DNAJC8O75937 253 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 ATG7O95352 703 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 NUDT14O95848 222 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 COL6A1P12109 1028 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 KCNE1P15382 129 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 CHRNB2P17787 502 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PPP2R1BP30154 601 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 C21orf59P57076 290 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 GRSF1Q12849 480 aaKnown RBP eCLIP9.29□□□□□ -0.92
GGA3-223ENST00000621870 VITQ6UXI7 678 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 AGMOQ6ZNB7 445 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 ZNF621Q6ZSS3 439 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 P3H2Q8IVL5 708 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 C2orf73Q8N5S3 287 aaPredicted RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 CDYL2Q8N8U2 506 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 OSCP1Q8WVF1 389 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 KLHL32Q96NJ5 620 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 DPEP2Q9H4A9 486 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 PSME2Q9UL46 239 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 IRS2Q9Y4H2 1338 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 BAZ2AQ9UIF9 1905 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 TRIOBPQ9H2D6 2365 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 KAT6AQ92794 2004 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 ATP6AP2A0A1C7CYW4 349 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 TCRBV9S1A1TA0A576 114 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 OR2AG2A6NM03 316 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 ATP6AP2O75787 350 aa9.29□□□□□ -0.92
GGA3-223ENST00000621870 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
GGA3-223ENST00000621870 ITGA2BP08514 1039 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms