RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 SRLQ86TD4 932 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 ZSWIM9Q86XI8 627 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 MARCH9Q86YJ5 346 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CPNE8Q86YQ8 564 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CAMK1DQ8IU85 385 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CCDC112Q8NEF3 446 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 FAM174AQ8TBP5 190 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 HCAR2Q8TDS4 363 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 TEKT4Q8WW24 435 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 TSC1Q92574 1164 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CENPTQ96BT3 561 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 BAG1Q99933 345 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 PCDH18Q9HCL0 1135 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 ZMIZ1Q9ULJ6 1067 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 SHROOM3Q8TF72 1996 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 SSU72P8A0A1W2PR75 194 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 TSPAN11A1L157 253 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 TRIM38O00635 465 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 FPGTO14772 594 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 MUSKO15146 869 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 FZD2Q14332 565 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 GRM3Q14832 879 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 UGP2Q16851 508 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 TPRG1LQ5T0D9 272 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 TMCO3Q6UWJ1 677 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 DCP2Q8IU60 420 aaKnown RBP18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 CCDC170Q8IYT3 715 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 ZNF564Q8TBZ8 553 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 NSMCE3Q96MG7 304 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 ZNF641Q96N77 438 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 WRAP53Q9BUR4 548 aaKnown RBP18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 PACSIN1Q9BY11 444 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 NHEJ1Q9H9Q4 299 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 ZZEF1O43149 2961 aa18.13■□□□□ 0.49
SCAMP4-213ENST00000621748 SPTY2D1-AS1A0A0U1RR47 76 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 SIGLEC6O43699 453 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PIAS2O75928 621 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 TM7SF2O76062 418 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PEX11BO96011 259 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 CAPNS1P04632 268 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PRKCGP05129 697 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 GIMD1P0DJR0 217 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 IL4RP24394 825 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 RABIFP47224 123 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 ACADVLP49748 655 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PFN3P60673 137 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 NSUN2Q08J23 767 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 SLC10A7Q0GE19 358 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 RFTN1Q14699 578 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 SMAD1Q15797 465 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 TMEM52BQ4KMG9 183 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 ATP13A4Q4VNC1 1196 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 TXLNBQ8N3L3 684 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 DENND6BQ8NEG7 585 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 CXorf40AQ8TE69 158 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 IFT43Q96FT9 208 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 TUBGCP5Q96RT8 1024 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 CINPQ9BW66 212 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PCDH12Q9NPG4 1184 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 MBNL1Q9NR56 388 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 DNAJC28Q9NX36 388 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 PCDHGA1Q9Y5H4 931 aa18.12■□□□□ 0.49
SCAMP4-213ENST00000621748 FAM149AA5PLN7 773 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 RIOK3O14730 519 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 MAFKO60675 156 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 CD48P09326 243 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 IGFALSP35858 605 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 SSR1P43307 286 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 SUOXP51687 545 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 CDH6P55285 790 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 SEMG2Q02383 582 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 ELP6Q0PNE2 266 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 MMRN1Q13201 1228 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 PDE1CQ14123 709 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 LBRQ14739 615 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 PROX2Q3B8N5 592 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 BRAT1Q6PJG6 821 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 TP53I13Q8NBR0 393 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 FAM71BQ8TC56 605 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 PSKH2Q96QS6 385 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 CHP1Q99653 195 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 ATP13A3Q9H7F0 1226 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 CTTNBP2NLQ9P2B4 639 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 KLF15Q9UIH9 416 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 COQ6Q9Y2Z9 468 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 CFAP47Q6ZTR5 3102 aa18.11■□□□□ 0.49
SCAMP4-213ENST00000621748 TTC24A2A3L6 582 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 FFAR2O15552 330 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 RFPL3O75679 317 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 CSF2P04141 144 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 H2AFZP0C0S5 128 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 CKMT2P17540 419 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 SCNN1BP51168 640 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 ARSEP51690 589 aa18.1■□□□□ 0.49
SCAMP4-213ENST00000621748 CLDN6P56747 220 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms