RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CHRM3P20309 590 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TAC1P20366 129 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 HOXD9P28356 352 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 TAS2R39P59534 338 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 MGAT5Q09328 741 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 CCDC121Q6ZUS5 278 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TTC30BQ8N4P2 665 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 USP13Q92995 863 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 ASIC4Q96FT7 647 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TDP1Q9NUW8 608 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 RRP15Q9Y3B9 282 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TMEM233B4DJY2 109 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 KPNA3O00505 521 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 FGF10O15520 208 aaPredicted RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 ANXA9O76027 345 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 GUCA1CO95843 209 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 FAM107AO95990 144 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TYRP14679 529 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 TARSP26639 723 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 SERPINB3P29508 390 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 SCNN1AP37088 669 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 SLC6A11P48066 632 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 SERPINB4P48594 390 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 NAGLUP54802 743 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 ALDH18A1P54886 795 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 SLC12A1Q13621 1099 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 DENND5AQ6IQ26 1287 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 PPP4R1Q8TF05 950 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 MANSC1Q9H8J5 431 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 OLA1Q9NTK5 396 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 AAR2Q9Y312 384 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 C1orf232A0A0U1RR37 186 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 EIF4E1BA6NMX2 242 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 DIAPH2O60879 1101 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 RFPL1O75677 317 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 DRD4P21917 467 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 PPM1AP35813 382 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 BST1Q10588 318 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 C2orf27AQ580R0 203 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 CES4AQ5XG92 561 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 BNIPLQ7Z465 357 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 POU5F2Q8N7G0 328 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 SCAMP4Q969E2 229 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 ERP27Q96DN0 273 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 PNPOQ9NVS9 261 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 FBXO5Q9UKT4 447 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
VPS11-208ENST00000621676 COQ6Q9Y2Z9 468 aa10.61□□□□□ -0.71
VPS11-208ENST00000621676 CCDC162PA2VCL2 907 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 INPP4BO15327 924 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 NCAM2O15394 837 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 GOT2P00505 430 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 OAS1P00973 400 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 CHRNGP07510 517 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 NCF2P19878 526 aaPredicted RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 HADHAP40939 763 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PLIN5Q00G26 463 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 NR1H3Q13133 447 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 LGSNQ5TDP6 509 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 OTOAQ7RTW8 1153 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 LYSMD3Q7Z3D4 306 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 CCDC197Q8NCU1 140 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 EBF4Q9BQW3 602 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 WRAP53Q9BUR4 548 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 GALPQ9UBC7 116 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 BACE2Q9Y5Z0 518 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TBC1D3BA6NDS4 549 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TCAF2A6NFQ2 919 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TTC34A8MYJ7 566 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 CD1EP15812 388 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PBLDP30039 288 aaPredicted RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 GEMP55040 296 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TRAF2Q12933 501 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 HNRNPDQ14103 355 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 DGKKQ5KSL6 1271 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TEDDM1Q5T9Z0 273 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 CXorf57Q6NSI4 855 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 ARCQ7LC44 396 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 MTDHQ86UE4 582 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 TRIM74Q86UV6 250 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 ITIH5Q86UX2 942 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 HIPK4Q8NE63 616 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TRIM62Q9BVG3 475 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 ALG9Q9H6U8 611 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 TMEM248Q9NWD8 314 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 IGSF9Q9P2J2 1179 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 RCOR3Q9P2K3 495 aaPredicted RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 PRKAB1Q9Y478 270 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 E7ESA3 106 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PPP6CO00743 305 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 STX7O15400 261 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 UBOX5O94941 541 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms