RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CYP4F12Q9HCS2 524 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 ARMC1Q9NVT9 282 aa19.73■□□□□ 0.75
PDLIM3-212ENST00000620787 SH3PXD2BA1X283 911 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CACNG3O60359 315 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 GNAO1P09471 354 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 AKAP5P24588 427 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 LRPAP1P30533 357 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC7A2P52569 658 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 RABGGTBP53611 331 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 GJA9P57773 515 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 PRAMEP78395 509 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 FAM219BQ5XKK7 198 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CUZD1Q86UP6 607 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 GPR180Q86V85 440 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CLVS1Q8IUQ0 354 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 OR9I1Q8NGQ6 314 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 OR2T34Q8NGX1 318 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 OR2T3Q8NH03 318 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 TCF12Q99081 682 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 TBL1YQ9BQ87 522 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC39A3Q9BRY0 314 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 C16orf70Q9BSU1 422 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 GOLGA2P5Q9HBQ8 144 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 SLC2A6Q9UGQ3 507 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 YJEFN3A6XGL0 299 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 A8MT66 165 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 PSMD3O43242 534 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 AKAP10O43572 662 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CD4P01730 458 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 HNRNPCP07910 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 KPNA2P52292 529 aaKnown RBP19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 PFKPQ01813 784 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 ZBED5Q49AG3 693 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 PITRM1Q5JRX3 1037 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 Q6ZNX1 250 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 MFSD2AQ8NA29 543 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 CELF6Q96J87 481 aaKnown RBP19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 ULBP1Q9BZM6 244 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 FAIMQ9NVQ4 179 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 SMOXQ9NWM0 555 aa19.72■□□□□ 0.75
PDLIM3-212ENST00000620787 A0A087WXM4 84 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 SAC3D1A6NKF1 404 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 GRIA3P42263 894 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 TAF6P49848 677 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 TMEM62Q0P6H9 643 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 CSHL1Q14406 222 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 DENND5AQ6IQ26 1287 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 ELMSAN1Q6PJG2 1045 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 CATSPER4Q7RTX7 472 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 EPHX4Q8IUS5 362 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 AFAP1L2Q8N4X5 818 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 C2CD4AQ8NCU7 369 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 UPF3AQ9H1J1 476 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 MRM3Q9HC36 420 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 GINS2Q9Y248 185 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 NRCAMQ92823 1304 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 SMIM28A0A1B0GU29 152 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 ZNF701M0R085 212 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 GPC4O75487 556 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 MT-CYBP00156 380 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 WARSP23381 471 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 CD151P48509 253 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 SOX4Q06945 474 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 GRIK4Q16099 956 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 BTBD8Q5XKL5 378 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 CYHR1Q6ZMK1 362 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 SMYD1Q8NB12 490 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 ADAMTS16Q8TE57 1224 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 C12orf43Q96C57 262 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 ADAMTS10Q9H324 1103 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 EML4Q9HC35 981 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 CHST12Q9NRB3 414 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 TBCCD1Q9NVR7 557 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 KLK14Q9P0G3 267 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 RBPJLQ9UBG7 517 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 SFMBT1Q9UHJ3 866 aa19.71■□□□□ 0.75
PDLIM3-212ENST00000620787 HUS1O60921 280 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 IPO13O94829 963 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 MYF6P23409 242 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 MAP3K7CLP57077 242 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 DAOAP59103 153 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 POU4F1Q01851 419 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PLOD1Q02809 727 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 RBM20Q5T481 1227 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 ZNF470Q6ECI4 717 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PACRGLQ8N7B6 248 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PPHLN1Q8NEY8 458 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 TSGA13Q96PP4 275 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 DDIT4Q9NX09 232 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PTBP2Q9UKA9 531 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 TCAF1Q9Y4C2 921 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 PPP2R3BQ9Y5P8 575 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 BRCA1P38398 1863 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 TRIM64A6NGJ6 449 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 FZD9O00144 591 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 AURKAO14965 403 aa19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 HSPA8P11142 646 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-212ENST00000620787 CPB1P15086 417 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms