RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 C1orf232A0A0U1RR37 186 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PDZK1P1A8MUH7 402 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 DHX15O43143 795 aaKnown RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ECHS1P30084 290 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CYP2C18P33260 490 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PRKD1Q15139 912 aaPredicted RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 TXNRD3NBQ6F5E7 133 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 AMIGO2Q86SJ2 522 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CAMK1DQ8IU85 385 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 METTL6Q8TCB7 284 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 MAGEE2Q8TD90 523 aaPredicted RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 MTFMTQ96DP5 389 aaKnown RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 POLR1EQ9GZS1 481 aaKnown RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 MTFR1LQ9H019 292 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PKD1L3Q7Z443 1732 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 C15orf38-AP3S2A0A0A6YYH1 394 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 MDM4O15151 490 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 SEC22BO75396 215 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 IFNA14P01570 189 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 IL1R2P27930 398 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 FAM171A1Q5VUB5 890 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ARPINQ7Z6K5 226 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 FAM126BQ8IXS8 530 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 TOP6BLQ8N6T0 577 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 LPPQ93052 612 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 SMIM31A0A1B0GVY4 71 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 EME2A4GXA9 379 aaPredicted RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 GPR25O00155 361 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CSH1P0DML2 217 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CSH2P0DML3 217 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 NR1H2P55055 460 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 C21orf59P57076 290 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 COX10Q12887 443 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CA9Q16790 459 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 RALGPS1Q5JS13 557 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PRAMEF19Q5SWL8 479 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ARMCX6Q7L4S7 300 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 OTOP3Q7RTS5 596 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 GPSM1Q86YR5 675 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ZFYVE1Q9HBF4 777 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 AGRPO00253 132 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PEX11AO75192 247 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 KCNH1O95259 989 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 PSMB9P28065 219 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 POU1F1P28069 291 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 GPX6P59796 221 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 SLC5A9Q2M3M2 681 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 RAP1GAP2Q684P5 730 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CCDC103Q8IW40 242 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 DSELQ8IZU8 1212 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 CAMKK1Q8N5S9 505 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 MTERF3Q96E29 417 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ELOVL6Q9H5J4 265 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 ZDHHC6Q9H6R6 413 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
ALMS1-208ENST00000620466 UXTQ9UBK9 157 aaPredicted RBP8.4□□□□□ -1.06
ALMS1-208ENST00000620466 COL1A2P08123 1366 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 TSPAN1O60635 241 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 NELFEP18615 380 aaKnown RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 TKTP29401 623 aaKnown RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 AIF1P55008 147 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 HLA-DQA1Q5Y7H0 255 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ZYG11AQ6WRX3 759 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 KLRG1Q96E93 195 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 MAML3Q96JK9 1138 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 HMGXB4Q9UGU5 601 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 TRAFD1O14545 582 aaPredicted RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 RTN3O95197 1032 aaPredicted RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 IGSF6O95976 241 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 LYNP07948 512 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 LINC00032P0C843 101 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 BTG3Q14201 252 aaPredicted RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 CWF19L1Q69YN2 538 aaKnown RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 FAM35AQ86V20 835 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 AMIGO3Q86WK7 504 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 MPP5Q8N3R9 675 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ATG16L2Q8NAA4 619 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 DNAJB14Q8TBM8 379 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 LENG1Q96BZ8 264 aaPredicted RBP8.4□□□□□ -1.07
ALMS1-208ENST00000620466 TPD52L3Q96J77 140 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 OSBPL11Q9BXB4 747 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 RIBC2Q9H4K1 309 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ACTR8Q9H981 624 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ATP6V1HQ9UI12 483 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 ADAM30Q9UKF2 790 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 PSMD13Q9UNM6 376 aa8.4□□□□□ -1.07
ALMS1-208ENST00000620466 CRYBG1Q9Y4K1 1723 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 CAPN8A6NHC0 703 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 XYLBO75191 536 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 BMP10O95393 424 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 RAD23AP54725 363 aa8.39□□□□□ -1.07
ALMS1-208ENST00000620466 MAXP61244 160 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms