RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 SOCS2O14508 198 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
SKP2-209ENST00000620197 GPX3P22352 226 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 MYF6P23409 242 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 CCNCP24863 283 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 EPHX2P34913 555 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 TAS2R39P59534 338 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 STX5Q13190 355 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 NME3Q13232 169 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 DCTN2Q13561 401 aaKnown RBP13.19□□□□□ -0.3
SKP2-209ENST00000620197 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 KIAA0930Q6ICG6 404 aaPredicted RBP13.19□□□□□ -0.3
SKP2-209ENST00000620197 POTEHQ6S545 545 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
SKP2-209ENST00000620197 HERC6Q8IVU3 1022 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 TBL1YQ9BQ87 522 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 CSNK1G1Q9HCP0 422 aa13.19□□□□□ -0.3
SKP2-209ENST00000620197 A8MT66 165 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 STMN1P16949 149 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 AXLP30530 894 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 AVPR1AP37288 418 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 PPP1R3AQ16821 1122 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 ROPN1LQ96C74 230 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 APOL2Q9BQE5 337 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 POMKQ9H5K3 350 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 CCM2LQ9NUG4 571 aaPredicted RBP13.18□□□□□ -0.3
SKP2-209ENST00000620197 RRN3Q9NYV6 651 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 SLC8A2Q9UPR5 921 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 TTC24A2A3L6 582 aaPredicted RBP13.18□□□□□ -0.3
SKP2-209ENST00000620197 HEATR9A2RTY3 570 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 AKAP10O43572 662 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 LRIG2O94898 1065 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 MMP3P08254 477 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 LEPRP48357 1165 aaKnown RBP13.18□□□□□ -0.3
SKP2-209ENST00000620197 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 DGKDQ16760 1214 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 RANBP10Q6VN20 620 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 KIAA0408Q6ZU52 694 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 TMA16Q96EY4 203 aaKnown RBP13.18□□□□□ -0.3
SKP2-209ENST00000620197 PPP1R10Q96QC0 940 aaKnown RBP13.18□□□□□ -0.3
SKP2-209ENST00000620197 OLFM1Q99784 485 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 ARNT2Q9HBZ2 717 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 ARHGEF38Q9NXL2 777 aa13.18□□□□□ -0.3
SKP2-209ENST00000620197 TRIP12Q14669 1992 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 CFLARO15519 480 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 MAFKO60675 156 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 INHBBP09529 407 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 C7P10643 843 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 IGFBP6P24592 240 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 PRKCQQ04759 706 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 FXNQ16595 210 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ESRP1Q6NXG1 681 aaKnown RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 RETREG3Q86VR2 466 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 FNDC8Q8TC99 324 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 EME1Q96AY2 570 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 POLR3BQ9NW08 1133 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 RHBDL2Q9NX52 303 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 MAP10Q9P2G4 905 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 SLC2A6Q9UGQ3 507 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 MYRFQ9Y2G1 1151 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 AAR2Q9Y312 384 aaKnown RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 hCG_2014768A0A024R1R8 64 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ARHGEF37A1IGU5 675 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 PSMD12O00232 456 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 ACOX3O15254 700 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ALDOCP09972 364 aaKnown RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 ATP6V1B2P21281 511 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 AKAP5P24588 427 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 CTBP1Q13363 440 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 LPIN1Q14693 890 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 NRF1Q16656 503 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 SPATS1Q496A3 300 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 Q6ZNX1 250 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 PCDH20Q8N6Y1 951 aaKnown RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 TRPC7Q9HCX4 862 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 ZNF639Q9UID6 485 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 HEMK1Q9Y5R4 338 aaPredicted RBP13.17□□□□□ -0.3
SKP2-209ENST00000620197 FXYD1O00168 92 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 PTGESO14684 152 aa13.17□□□□□ -0.3
SKP2-209ENST00000620197 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms