RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 INSIG1O15503 277 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 GSTA2P09210 222 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 ATXN1LP0C7T5 689 aaKnown RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 CD70P32970 193 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 GP5P40197 560 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 SLC1A2P43004 574 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 CDK18Q07002 472 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CBLBQ13191 982 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 N4BP2L1Q5TBK1 243 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 CNSTQ6PJW8 725 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RAPH1Q70E73 1250 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 OTOAQ7RTW8 1153 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 LRRC49Q8IUZ0 686 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CCNJLQ8IV13 435 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 SLC41A1Q8IVJ1 513 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 MFN1Q8IWA4 741 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 NAT16Q8N8M0 369 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TDRD5Q8NAT2 981 aaKnown RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 SHKBP1Q8TBC3 707 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 ERLEC1Q96DZ1 483 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TBATAQ96M53 351 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 MAGEH1Q9H213 219 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 BPIFA1Q9NP55 256 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 NPHS2Q9NP85 383 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RRP15Q9Y3B9 282 aaKnown RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 TNRC18O15417 2968 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 GPR39O43194 453 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 KDELR3O43731 214 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RHOP08100 348 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 MSLNQ13421 630 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 C5orf22Q49AR2 442 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 ATG14Q6ZNE5 492 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TMEM25Q86YD3 366 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 ELMOD1Q8N336 334 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 GPATCH11Q8N954 259 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CCDC197Q8NCU1 140 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 OR13J1Q8NGT2 312 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 VPS39Q96JC1 886 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RBBP8Q99708 897 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CPNE1Q99829 537 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 EMILIN2Q9BXX0 1053 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TNKS2Q9H2K2 1166 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 MARCH4Q9P2E8 410 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 EMCNQ9ULC0 261 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CRYL1Q9Y2S2 319 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 MAGEB16A2A368 324 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RFXAPO00287 272 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TM9SF1O15321 606 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TMCC1O94876 653 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 PRAMEF12O95522 483 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 SERPINF2P08697 491 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 STK19P49842 368 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 SHHQ15465 462 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 EML3Q32P44 896 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 PSRC1Q6PGN9 363 aaPredicted RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 TMC5Q6UXY8 1006 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 Q6ZNB5 142 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CYS1Q717R9 158 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 SPATA21Q7Z572 469 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 CEP97Q8IW35 865 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 RFWD2Q8NHY2 731 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 FAM174AQ8TBP5 190 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 HERVK_113Q902F9 699 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 DNAJC1Q96KC8 554 aaKnown RBP7.86□□□□□ -1.15
NEK3-207ENST00000617054 DONSONQ9NYP3 566 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 VPS51Q9UID3 782 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 TBC1D30Q9Y2I9 924 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 SPO11Q9Y5K1 396 aa7.86□□□□□ -1.15
NEK3-207ENST00000617054 COL6A3P12111 3177 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 ILVBLA1L0T0 632 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LYPLA1O75608 230 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 LIG3P49916 1009 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 CDKN1CP49918 316 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 THOC5Q13769 683 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 CHI3L2Q15782 390 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 RBM20Q5T481 1227 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 GRTP1Q5TC63 336 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 FAM219BQ5XKK7 198 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 C6orf89Q6UWU4 347 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 CCDC149Q6ZUS6 474 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 EFHBQ8N7U6 833 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LPCAT1Q8NF37 534 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 ALKBH8Q96BT7 664 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 LBHD1Q9BQE6 289 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 SCUBE2Q9NQ36 999 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 TREX1Q9NSU2 369 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 USP15Q9Y4E8 981 aaPredicted RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 NUMBLQ9Y6R0 609 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 A0A096LPK6 155 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 TRAV19A0A0A6YYK7 116 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 A0A0G2JND7 137 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LOC285095A0A1B0GVY8 99 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 PSMD3O43242 534 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LDB2O43679 373 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 MOSPD3O75425 235 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 LUC7L3O95232 432 aaKnown RBP7.85□□□□□ -1.15
NEK3-207ENST00000617054 OLFM2O95897 454 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 GSRP00390 522 aa7.85□□□□□ -1.15
NEK3-207ENST00000617054 PRLP01236 227 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 582.1 ms