RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZBTB6Q15916 424 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AASDHQ4L235 1098 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 LIN52Q52LA3 116 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NOMO2Q5JPE7 1267 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMTC4Q5T4D3 741 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CUZD1Q86UP6 607 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RIN3Q8TB24 985 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DLG3Q92796 817 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 THAP11Q96EK4 314 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 GPR22Q99680 433 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 APOL5Q9BWW9 433 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MKS1Q9NXB0 559 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AFF4Q9UHB7 1163 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANKRD6Q9Y2G4 727 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NDUFAF1Q9Y375 327 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYH3P11055 1940 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NRP2O60462 931 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSMC3P17980 439 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PAX3P23760 479 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RPL5P46777 297 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SMAD3P84022 425 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DSC2Q02487 901 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DDX39BQ13838 428 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 IMPG1Q17R60 797 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AARS2Q5JTZ9 985 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MARCH8Q5T0T0 291 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RNF220Q5VTB9 566 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AMIGO2Q86SJ2 522 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DHFR2Q86XF0 187 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NPWQ8N729 165 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PNPLA1Q8N8W4 532 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRPC4APQ8TEL6 797 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HEXDCQ8WVB3 486 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 IRGQQ8WZA9 623 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NMD3Q96D46 503 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TM6SF2Q9BZW4 377 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC39A8Q9C0K1 460 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 OSBPL2Q9H1P3 480 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CXCL16Q9H2A7 254 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ACTR8Q9H981 624 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 WDR6Q9NNW5 1121 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TLR8Q9NR97 1041 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDH22Q9UJ99 828 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AP4S1Q9Y587 144 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 UBR2Q8IWV8 1755 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 KCNU1A8MYU2 1149 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 BTN3A1O00481 513 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 DEAF1O75398 565 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FGF3P11487 239 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR1D2P34982 312 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PBX3P40426 434 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 DUSP4Q13115 394 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 DYNC1I2Q13409 638 aaKnown RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 NFYCQ13952 458 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PKDCCQ504Y2 493 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.67□□□□□ -1.54e-7■■■■■ 31
SYNCRIP-204ENST00000616122 ANKLE1Q8NAG6 615 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXO27Q8NI29 283 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 UCMAQ8WVF2 138 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSMG2Q969U7 264 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FUBP3Q96I24 572 aaKnown RBP eCLIP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 BTN2A3PQ96KV6 586 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ECSITQ9BQ95 431 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 RHOBTB2Q9BYZ6 727 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ADAMTS10Q9H324 1103 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 POMKQ9H5K3 350 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEMA4BQ9NPR2 832 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TCAF1Q9Y4C2 921 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 N4BP2Q86UW6 1770 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TUBGCP6Q96RT7 1819 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 NUP205Q92621 2012 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZCWPW2A0A1B0GU75 182 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMEM114B3SHH9 223 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CFAP99D6REC4 459 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 H0Y626 953 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 AZIN1O14977 448 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEPT4O43236 478 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 GABBR2O75899 941 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRIM16O95361 564 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SNRPB2P08579 225 aaKnown RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ITGALP20701 1170 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALDH1A3P47895 512 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBTB17Q13105 803 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ITGA7Q13683 1181 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF460Q14592 562 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 NRF1Q16656 503 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 OTUD3Q5T2D3 398 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 MBLAC2Q68D91 279 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SCIMPQ6UWF3 145 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 STYXQ8WUJ0 223 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PAAF1Q9BRP4 392 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 S100A14Q9HCY8 104 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 OXSMQ9NWU1 459 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 HACD3Q9P035 362 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYH7P12883 1935 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 C9JVG2 144 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF197O14709 1029 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 GSTA4O15217 222 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 XRCC1P18887 633 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms