RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TMEM114B3SHH9 223 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 PIGRP01833 764 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 AHSGP02765 367 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 HSPA8P11142 646 aaKnown RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 KCNA5P22460 613 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 NDUFV1P49821 464 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 RPL26P61254 145 aaKnown RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 TXNL4AP83876 142 aaKnown RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 RGS21Q2M5E4 152 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 SPANXN3Q5MJ09 141 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
MSH6-214ENST00000616033 TAMM41Q96BW9 452 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 NPLQ9BXD5 320 aaPredicted RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 SIK2Q9H0K1 926 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 SNX25Q9H3E2 840 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 TMEM134Q9H6X4 195 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 NOX1Q9Y5S8 564 aa13.27□□□□□ -0.29
MSH6-214ENST00000616033 MAGED1Q9Y5V3 778 aaPredicted RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.29
MSH6-214ENST00000616033 FAM72CH0Y354 149 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 CLDN5O00501 218 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 PMPCBO75439 489 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 PGK2P07205 417 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 IL10P22301 178 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 STX1BP61266 288 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 LAMC2Q13753 1193 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 FAM72AQ5TYM5 149 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 FAM72DQ6L9T8 149 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 BORAQ6PGQ7 559 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 FAM72BQ86X60 149 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 PSD4Q8NDX1 1056 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 TPK1Q9H3S4 243 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 TSR3Q9UJK0 312 aaKnown RBP13.26□□□□□ -0.29
MSH6-214ENST00000616033 USP22Q9UPT9 525 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
MSH6-214ENST00000616033 DHRS12A0PJE2 317 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 MPOP05164 745 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 SNRPB2P08579 225 aaKnown RBP13.26□□□□□ -0.29
MSH6-214ENST00000616033 MATN1P21941 496 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 FPGSQ05932 587 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 ZYG11AQ6WRX3 759 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 LPAR1Q92633 364 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 CCDC138Q96M89 665 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 SLC2A6Q9UGQ3 507 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 LOXHD1Q8IVV2 1947 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 EVPLQ92817 2033 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 TIMM44O43615 452 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 NRP2O60462 931 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 HUS1O60921 280 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 XYLBO75191 536 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 BAIAP3O94812 1187 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 SBK3P0C264 359 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 LMO2P25791 158 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 SLC7A1P30825 629 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 DPYSQ14117 519 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 NHSL2Q5HYW2 709 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 NOMO2Q5JPE7 1267 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 STEAP4Q687X5 459 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 RWDD4Q6NW29 188 aaKnown RBP13.26□□□□□ -0.29
MSH6-214ENST00000616033 KDM1BQ8NB78 822 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
MSH6-214ENST00000616033 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 NCKIPSDQ9NZQ3 722 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 BTRCQ9Y297 605 aa13.26□□□□□ -0.29
MSH6-214ENST00000616033 FAM95CA0A1B0GW59 222 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 STMN1P16949 149 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 APLP1P51693 650 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ARPC4P59998 168 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PFKPQ01813 784 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ADIGQ0VDE8 80 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 LRP8Q14114 963 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ZNF829Q3KNS6 432 aaPredicted RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 STXBP5Q5T5C0 1151 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ESRP1Q6NXG1 681 aaKnown RBP13.25□□□□□ -0.29
MSH6-214ENST00000616033 LCLAT1Q6UWP7 414 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 DHRSXQ8N5I4 330 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 SLC7A14Q8TBB6 771 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 HEXDCQ8WVB3 486 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 RNF34Q969K3 372 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 POU2F3Q9UKI9 436 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 ZCWPW2A0A1B0GU75 182 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 DFFAO00273 331 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PPP6CO00743 305 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 PLA2G6O60733 806 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 SLC35E2BP0CK96 405 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 CCNA2P20248 432 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 BDNFP23560 247 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 FASP25445 335 aa13.25□□□□□ -0.29
MSH6-214ENST00000616033 TAS2R39P59534 338 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms