RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RAD51Q06609 339 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 TRAF2Q12933 501 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 ZNF235Q14590 738 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 STAT4Q14765 748 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 PDK2Q15119 407 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 TCEAL1Q15170 157 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 PTAR1Q7Z6K3 402 aaPredicted RBP12.78□□□□□ -0.36
CSTF1-208ENST00000613138 RFX6Q8HWS3 928 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 TPCN2Q8NHX9 752 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 PSKH2Q96QS6 385 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 LGMNQ99538 433 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 DKK3Q9UBP4 350 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 PNMA8BQ9ULN7 279 aaPredicted RBP12.78□□□□□ -0.36
CSTF1-208ENST00000613138 HEY1Q9Y5J3 304 aa12.78□□□□□ -0.36
CSTF1-208ENST00000613138 A0A1B0GTQ1 180 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 CBFA2T3O75081 653 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 HLA-DQB2P05538 268 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 ADRB1P08588 477 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 GM2AP17900 193 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 HNRNPA2B1P22626 353 aaKnown RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 CDC25BP30305 580 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 SERPINB6P35237 376 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 IGFALSP35858 605 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 RPS21P63220 83 aaKnown RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 NIPAL4Q0D2K0 466 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 RALGDSQ12967 914 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 SPA17Q15506 151 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 UGP2Q16851 508 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 KAZNQ674X7 775 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 KIAA1161Q6NSJ0 714 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 NEK5Q6P3R8 708 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 IL27RAQ6UWB1 636 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 Q6ZSR6 202 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 PELI3Q8N2H9 469 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 MFSD2AQ8NA29 543 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 KLHDC7BQ96G42 594 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 ELF4Q99607 663 aaPredicted RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
CSTF1-208ENST00000613138 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 PCOLCE2Q9UKZ9 415 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 DMTF1Q9Y222 760 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 TTLL3Q9Y4R7 772 aa12.77□□□□□ -0.37
CSTF1-208ENST00000613138 ASXL3Q9C0F0 2248 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 KCNK1O00180 336 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 SCAMP1O15126 338 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TSPAN6O43657 245 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 PDHA1P08559 390 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 C6P13671 934 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CEACAM1P13688 526 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 PECAM1P16284 738 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CTPS1P17812 591 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 AKT2P31751 481 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MMP12P39900 470 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CDKN2BP42772 138 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CSNK1DP48730 415 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CCT8P50990 548 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 HADHBP55084 474 aaKnown RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 BCL2L1Q07817 233 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ITKQ08881 620 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 FOXC1Q12948 553 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 RFTN1Q14699 578 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 IRF4Q15306 451 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TCEA2Q15560 299 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TMEM52BQ4KMG9 183 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 KCTD16Q68DU8 428 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MARCH9Q86YJ5 346 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 RHOT1Q8IXI2 618 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TEX26Q8N6G2 289 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TP53I13Q8NBR0 393 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 CXorf40AQ8TE69 158 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 MAML1Q92585 1016 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 SEMA3CQ99985 751 aa12.76□□□□□ -0.37
CSTF1-208ENST00000613138 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-208ENST00000613138 ATP13A3Q9H7F0 1226 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms