RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 FUBP1Q96AE4 644 aaKnown RBP23.7■■□□□ 1.38
MMP28-203ENST00000612672 EDEM3Q9BZQ6 932 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 NOL6Q9H6R4 1146 aaKnown RBP23.7■■□□□ 1.38
MMP28-203ENST00000612672 METTL5Q9NRN9 209 aaKnown RBP23.7■■□□□ 1.38
MMP28-203ENST00000612672 TMEM248Q9NWD8 314 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 FOXJ2Q9P0K8 574 aa23.7■■□□□ 1.38
MMP28-203ENST00000612672 TMCC1O94876 653 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 GJB6O95452 261 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 CCKBRP32239 447 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 SNRPD1P62314 119 aaKnown RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 CYP4F2P78329 520 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 WSCD2Q2TBF2 565 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 ACBD5Q5T8D3 534 aaPredicted RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 RWDD4Q6NW29 188 aaKnown RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 NOP9Q86U38 636 aaKnown RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 ZFAND4Q86XD8 727 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 FSTL5Q8N475 847 aaPredicted RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 PDXPQ96GD0 296 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 OSBPL1AQ9BXW6 950 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 LRRN3Q9H3W5 708 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 OR12D3Q9UGF7 316 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 RWDD2AQ9UIY3 292 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 GPR34Q9UPC5 381 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 LOXL2Q9Y4K0 774 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 PCDHGA4Q9Y5G9 962 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 HEMK1Q9Y5R4 338 aaPredicted RBP23.69■■□□□ 1.38
MMP28-203ENST00000612672 FHOD1Q9Y613 1164 aa23.69■■□□□ 1.38
MMP28-203ENST00000612672 PRAMEF33A0A0G2JMD5 474 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 CXorf51AA0A1B0GTR3 108 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 PRAMEF10O60809 474 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 LRIG2O94898 1065 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 POP4O95707 220 aaKnown RBP23.68■■□□□ 1.38
MMP28-203ENST00000612672 LIPCP11150 499 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 MAPKAPK2P49137 400 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 NRG1Q02297 640 aaPredicted RBP23.68■■□□□ 1.38
MMP28-203ENST00000612672 EIF3IQ13347 325 aaKnown RBP23.68■■□□□ 1.38
MMP28-203ENST00000612672 POLD3Q15054 466 aaPredicted RBP23.68■■□□□ 1.38
MMP28-203ENST00000612672 CDO1Q16878 200 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 RD3Q7Z3Z2 195 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 PHLDB2Q86SQ0 1253 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 CPA5Q8WXQ8 436 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 ARHGEF26Q96DR7 871 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 DOLKQ9UPQ8 538 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 OR1A2Q9Y585 309 aa23.68■■□□□ 1.38
MMP28-203ENST00000612672 UTP20O75691 2785 aaKnown RBP23.67■■□□□ 1.38
MMP28-203ENST00000612672 PIGNO95427 931 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 FGFR1OPO95684 399 aaKnown RBP23.67■■□□□ 1.38
MMP28-203ENST00000612672 RHOQP17081 205 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 ADRA1BP35368 520 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 NOMO3P69849 1222 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 ELOCQ15369 112 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 ENPP7Q6UWV6 458 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 CCDC185Q8N715 623 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 Q8N9G6 341 aaPredicted RBP23.67■■□□□ 1.38
MMP28-203ENST00000612672 GPR156Q8NFN8 814 aa23.67■■□□□ 1.38
MMP28-203ENST00000612672 ZFC3H1O60293 1989 aaKnown RBP23.67■■□□□ 1.38
MMP28-203ENST00000612672 SUV39H1O43463 412 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 MMEP08473 750 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 ZFP36L1Q07352 338 aaKnown RBP23.66■■□□□ 1.38
MMP28-203ENST00000612672 NFATC4Q14934 902 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 TBR1Q16650 682 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 CCDC14Q49A88 953 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 TMEM52BQ4KMG9 183 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 LVRNQ6Q4G3 990 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 JOSD2Q8TAC2 188 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 EXOC2Q96KP1 924 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 TTYH3Q9C0H2 523 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 STRADBQ9C0K7 418 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 MAGEH1Q9H213 219 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 PDCL3Q9H2J4 239 aa23.66■■□□□ 1.38
MMP28-203ENST00000612672 C9orf172C9J069 976 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 NVLO15381 856 aaKnown RBP23.65■■□□□ 1.38
MMP28-203ENST00000612672 KDELR3O43731 214 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 RAMP2O60895 175 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 ITGB2P05107 769 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 ALPIP09923 528 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 CTSEP14091 401 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 ETFBP38117 255 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 MTIF2P46199 727 aaKnown RBP23.65■■□□□ 1.38
MMP28-203ENST00000612672 SRP54P61011 504 aaKnown RBP23.65■■□□□ 1.38
MMP28-203ENST00000612672 RAPGEF1Q13905 1077 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 INPP5AQ14642 412 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 CLCA4Q14CN2 919 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 LRRC14Q15048 493 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 MIIPQ5JXC2 388 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 COLEC12Q5KU26 742 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 NAA35Q5VZE5 725 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 ZSWIM9Q86XI8 627 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 CCNJLQ8IV13 435 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 PLA2G15Q8NCC3 412 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 GPT2Q8TD30 523 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 RXFP2Q8WXD0 754 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 GDAP1L1Q96MZ0 367 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 APOOQ9BUR5 198 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 DKK3Q9UBP4 350 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 LHX3Q9UBR4 397 aa23.65■■□□□ 1.38
MMP28-203ENST00000612672 NBASA2RRP1 2371 aa23.64■■□□□ 1.38
MMP28-203ENST00000612672 TOR1BO14657 336 aa23.64■■□□□ 1.37
MMP28-203ENST00000612672 RASGRP1O95267 797 aa23.64■■□□□ 1.37
MMP28-203ENST00000612672 PRKCGP05129 697 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms