RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ZFRQ96KR1 1074 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 PPP1R10Q96QC0 940 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 TUBGCP5Q96RT8 1024 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SLC39A8Q9C0K1 460 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 CASS4Q9NQ75 786 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 KANSL3Q9P2N6 904 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SNNO75324 88 aaPredicted RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 AHSGP02765 367 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 RPLP2P05387 115 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 XPAP23025 273 aaPredicted RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 EEF1DP29692 281 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 SLC1A2P43004 574 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 RPL5P46777 297 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 SLC7A2P52569 658 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 PGGT1BP53609 377 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 CAPRIN1Q14444 709 aaKnown RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 VEPH1Q14D04 833 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 HECTD2Q5U5R9 776 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ZNF467Q7Z7K2 595 aaPredicted RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 IRGQQ8WZA9 623 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 RMND5BQ96G75 393 aaPredicted RBP8.75□□□□□ -1.01
LIG4-204ENST00000611712 SEPHS2Q99611 448 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ADAMTS10Q9H324 1103 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 CRTAC1Q9NQ79 661 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 FAM8A1Q9UBU6 413 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
LIG4-204ENST00000611712 PDE4DIPQ5VU43 2346 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 E9PAM4 449 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 BTN3A1O00481 513 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 IL1BP01584 269 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CCR10P46092 362 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 HCAR3P49019 387 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 RGS4P49798 205 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 PSMD5Q16401 504 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GPR158Q5T848 1215 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 STEAP4Q687X5 459 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 FAM45BPQ6NSW5 357 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CNSTQ6PJW8 725 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 EPGNQ6UW88 154 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 SNX31Q8N9S9 440 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 FAM45AQ8TCE6 357 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 MZB1Q8WU39 189 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 ACBD6Q9BR61 282 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 C17orf80Q9BSJ5 609 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 THUMPD3Q9BV44 507 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 AGO3Q9H9G7 860 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 CATSPERZQ9NTU4 200 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 PADI3Q9ULW8 664 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 LZTS1Q9Y250 596 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 BTRCQ9Y297 605 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 SNX5Q9Y5X3 404 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 NRP2O60462 931 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 DLX3O60479 287 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 F2P00734 622 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 ALBP02768 609 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 RHOCP08134 193 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 LBPP18428 481 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 THOP1P52888 689 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 DSC2Q02487 901 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 NIPAL4Q0D2K0 466 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GALNT2Q10471 571 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CYP51A1Q16850 503 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CLEC6AQ6EIG7 209 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GLT6D1Q7Z4J2 308 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 MON1AQ86VX9 555 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CNTD1Q8N815 330 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 SOCS4Q8WXH5 440 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 ZDHHC2Q9UIJ5 367 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 THSD7AQ9UPZ6 1657 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 SMIM31A0A1B0GVY4 71 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 TMEM233B4DJY2 109 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CLASP2O75122 1294 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 HGFP14210 728 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 HOXB8P17481 243 aaPredicted RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 XRCC1P18887 633 aaPredicted RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 ABL2P42684 1182 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 MAGEA6P43360 314 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 FCGRTP55899 365 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 SCIMPQ6UWF3 145 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GPR141Q7Z602 305 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 CLYBLQ8N0X4 340 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 ADCY4Q8NFM4 1077 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 STAG3L4Q8TBR4 150 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 PTCD2Q8WV60 388 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 CENPIQ92674 756 aaPredicted RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 FCRL5Q96RD9 977 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GPR22Q99680 433 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 KCTD14Q9BQ13 255 aaPredicted RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 OXCT2Q9BYC2 517 aaPredicted RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 ATP13A1Q9HD20 1204 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 MTMR10Q9NXD2 777 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 GNEQ9Y223 722 aaKnown RBP8.74□□□□□ -1.01
LIG4-204ENST00000611712 MYRFQ9Y2G1 1151 aa8.74□□□□□ -1.01
LIG4-204ENST00000611712 A0A088AWK7 358 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 ZBBXA8MT70 800 aa8.73□□□□□ -1.01
LIG4-204ENST00000611712 H0Y626 953 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms