RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 NPWQ8N729 165 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 NETO2Q8NC67 525 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 FAM71BQ8TC56 605 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 OR8D1Q8WZ84 308 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 RNF25Q96BH1 459 aaPredicted RBP17.92■□□□□ 0.46
MUC1-224ENST00000611577 FAM129BQ96TA1 746 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 LRRC19Q9H756 370 aa17.92■□□□□ 0.46
MUC1-224ENST00000611577 TPX2Q9ULW0 747 aaKnown RBP17.92■□□□□ 0.46
MUC1-224ENST00000611577 FCF1Q9Y324 198 aaKnown RBP17.92■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3DA0A087WVF3 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3IA0A087WXS9 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3EA0A087X179 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3KA0A087X1G2 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 A0A0U1RQJ8 604 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3FA6NER0 549 aaPredicted RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3LB9A6J9 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TK2O00142 265 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 PALMO75781 387 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 C1QL1O75973 258 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 IL1BP01584 269 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3HP0C7X1 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 VAV1P15498 845 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3GQ6DHY5 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3CQ6IPX1 549 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TBC1D3Q8IZP1 549 aaPredicted RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 RYBPQ8N488 228 aaPredicted RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 ATPAF2Q8N5M1 289 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 SNIP1Q8TAD8 396 aaKnown RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 PTPRN2Q92932 1015 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 CEP44Q9C0F1 390 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 TNKS2Q9H2K2 1166 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 ERVMER34-1Q9H9K5 563 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 LZTFL1Q9NQ48 299 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 ETNK2Q9NVF9 386 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 UBA2Q9UBT2 640 aaPredicted RBP17.91■□□□□ 0.46
MUC1-224ENST00000611577 AMFRQ9UKV5 643 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 MFHAS1Q9Y4C4 1052 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 SHROOM3Q8TF72 1996 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 CFAP46Q8IYW2 2715 aa17.91■□□□□ 0.46
MUC1-224ENST00000611577 CXorf51AA0A1B0GTR3 108 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 GRID2IPA4D2P6 1211 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 APOL1O14791 398 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 SMAD6O43541 496 aaKnown RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 LATO43561 262 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 CKMT2P17540 419 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 RXRGP48443 463 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 ILKQ13418 452 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 SPATS2Q86XZ4 545 aaKnown RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 ARHGAP12Q8IWW6 846 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 RNF10Q8N5U6 811 aaKnown RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 PCDH20Q8N6Y1 951 aaKnown RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 PCDH19Q8TAB3 1148 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 FRS2Q8WU20 508 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 NSMCE1Q8WV22 266 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 CASKIN2Q8WXE0 1202 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 RBM41Q96IZ5 413 aaKnown RBP17.9■□□□□ 0.46
MUC1-224ENST00000611577 TM6SF2Q9BZW4 377 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 ACTL7AQ9Y615 435 aa17.9■□□□□ 0.46
MUC1-224ENST00000611577 ZNF462Q96JM2 2506 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 CCDC66A2RUB6 948 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 C1QTNF3-AMACRE9PGA6 284 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 BRINP1O60477 761 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.45
MUC1-224ENST00000611577 IL4RP24394 825 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 CETN2P41208 172 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 RHOAP61586 193 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 AFMIDQ63HM1 303 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 NCBP2-AS2Q69YL0 99 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 KANSL1Q7Z3B3 1105 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 PRPF39Q86UA1 669 aaKnown RBP17.89■□□□□ 0.45
MUC1-224ENST00000611577 VSIG1Q86XK7 387 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 KATNAL2Q8IYT4 538 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 RCOR2Q8IZ40 523 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 UBL4BQ8N7F7 174 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 MFSD2AQ8NA29 543 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 RNF157Q96PX1 679 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 ALS2CR12Q96Q35 445 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 KLC2Q9H0B6 622 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 IPO11Q9UI26 975 aaKnown RBP17.89■□□□□ 0.45
MUC1-224ENST00000611577 CLCA2Q9UQC9 943 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 PPP2R2CQ9Y2T4 447 aa17.89■□□□□ 0.45
MUC1-224ENST00000611577 ZNF487B1APH4 448 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 J3KR12 359 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 MFSD11O43934 449 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 PRAMEF11O60813 436 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 SDC3O75056 442 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 TMCC1O94876 653 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 FTCDO95954 541 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 ZFXP17010 805 aaPredicted RBP17.88■□□□□ 0.45
MUC1-224ENST00000611577 MAT2AP31153 395 aaKnown RBP17.88■□□□□ 0.45
MUC1-224ENST00000611577 CTNNA1P35221 906 aaKnown RBP17.88■□□□□ 0.45
MUC1-224ENST00000611577 DRD3P35462 400 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 METAP1P53582 386 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 RWDD2BP57060 319 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 SNRPD1P62314 119 aaKnown RBP17.88■□□□□ 0.45
MUC1-224ENST00000611577 DYNLT1P63172 113 aa17.88■□□□□ 0.45
MUC1-224ENST00000611577 IL10RBQ08334 325 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms