RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 HS1BP3Q53T59 392 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 ZNF542PQ5EBM4 170 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 KYAT3Q6YP21 454 aaKnown RBP16.62■□□□□ 0.25
TPGS2-220ENST00000610723 KDM7AQ6ZMT4 941 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 SLC22A18ASQ8N1D0 253 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 ATPAF2Q8N5M1 289 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 FAM174AQ8TBP5 190 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 ASB12Q8WXK4 309 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 ZNF599Q96NL3 588 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 KLF6Q99612 283 aaPredicted RBP16.62■□□□□ 0.25
TPGS2-220ENST00000610723 PCDH12Q9NPG4 1184 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 RCOR3Q9P2K3 495 aaPredicted RBP16.62■□□□□ 0.25
TPGS2-220ENST00000610723 COQ6Q9Y2Z9 468 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 NEUROG3Q9Y4Z2 214 aa16.62■□□□□ 0.25
TPGS2-220ENST00000610723 DOCK9Q9BZ29 2069 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 ENC1O14682 589 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 MAFKO60675 156 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 PRKCGP05129 697 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 SUOXP51687 545 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 ARSEP51690 589 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 SEMG2Q02383 582 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 NSUN2Q08J23 767 aaKnown RBP eCLIP16.61■□□□□ 0.25
TPGS2-220ENST00000610723 DPYSL3Q14195 570 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 TMEM52BQ4KMG9 183 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 ERAP2Q6P179 960 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 BRAT1Q6PJG6 821 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 ZSWIM9Q86XI8 627 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 DCP2Q8IU60 420 aaKnown RBP16.61■□□□□ 0.25
TPGS2-220ENST00000610723 FAM71BQ8TC56 605 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 NSMCE1Q8WV22 266 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
TPGS2-220ENST00000610723 PSKH2Q96QS6 385 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 CAAP1Q9H8G2 361 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 DNAJC28Q9NX36 388 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 LCMT1Q9UIC8 334 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 MSRB2Q9Y3D2 182 aa16.61■□□□□ 0.25
TPGS2-220ENST00000610723 TSPAN11A1L157 253 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 PTMAP06454 111 aaKnown RBP16.6■□□□□ 0.25
TPGS2-220ENST00000610723 RABIFP47224 123 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 DNAJC3Q13217 504 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 PDE1CQ14123 709 aaPredicted RBP16.6■□□□□ 0.25
TPGS2-220ENST00000610723 PDK2Q15119 407 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 UNQ6494/PRO21346Q6UXR6 183 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 KANSL1Q7Z3B3 1105 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 MAP7D3Q8IWC1 876 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 DENND6BQ8NEG7 585 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 CENPTQ96BT3 561 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 C1QTNF7Q9BXJ2 289 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 UCKL1Q9NWZ5 548 aa16.6■□□□□ 0.25
TPGS2-220ENST00000610723 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 RIOK3O14730 519 aaKnown RBP16.59■□□□□ 0.25
TPGS2-220ENST00000610723 MFSD11O43934 449 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 PEX11BO96011 259 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 KRT7P08729 469 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 DGKAP23743 735 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 MAN1A1P33908 653 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 IGFALSP35858 605 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 AP1S1P61966 158 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 FZD2Q14332 565 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 ST3GAL2Q16842 350 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 NCBP2-AS2Q69YL0 99 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 SLC25A45Q8N413 288 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 PGBD5Q8N414 524 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 PCDH19Q8TAB3 1148 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 NSMCE3Q96MG7 304 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 MBNL1Q9NR56 388 aaKnown RBP16.59■□□□□ 0.25
TPGS2-220ENST00000610723 ATP8A1Q9Y2Q0 1164 aa16.59■□□□□ 0.25
TPGS2-220ENST00000610723 SPTY2D1-AS1A0A0U1RR47 76 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 FFAR2O15552 330 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 MAP3K6O95382 1288 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 C6P13671 934 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 MMP13P45452 471 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 LIG3P49916 1009 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 PFN3P60673 137 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 MAXP61244 160 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 TPRG1LQ5T0D9 272 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 MARC1Q5VT66 337 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 TP53I13Q8NBR0 393 aaPredicted RBP16.58■□□□□ 0.24
TPGS2-220ENST00000610723 SPC24Q8NBT2 197 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 PDCD6IPQ8WUM4 868 aaKnown RBP16.58■□□□□ 0.24
TPGS2-220ENST00000610723 GATA6Q92908 595 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 ZNF670Q9BS34 389 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 GPR27Q9NS67 375 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 PCDHGC4Q9Y5F7 938 aa16.58■□□□□ 0.24
TPGS2-220ENST00000610723 TRPM6Q9BX84 2022 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.57■□□□□ 0.24
TPGS2-220ENST00000610723 FAM221BA6H8Z2 402 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 A8MX80 341 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 LZTS3O60299 673 aaPredicted RBP16.57■□□□□ 0.24
TPGS2-220ENST00000610723 PIAS2O75928 621 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 DKK1O94907 266 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 PROS1P07225 676 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 KDELR1P24390 212 aa16.57■□□□□ 0.24
TPGS2-220ENST00000610723 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
TPGS2-220ENST00000610723 MMP12P39900 470 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms