RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 LHX3Q9UBR4 397 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 ENTPD2Q9Y5L3 495 aa13.53□□□□□ -0.24
POLR2J3-219ENST00000608621 ANKRD62A6NC57 917 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 KLK10O43240 276 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 PIGNO95427 931 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 CELA2BP08218 269 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 LRRC14Q15048 493 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 IRF4Q15306 451 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 PARP15Q460N3 678 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 C6orf132Q5T0Z8 1188 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 ARHGAP40Q5TG30 622 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 ESRP1Q6NXG1 681 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 PCSK4Q6UW60 755 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 MACC1Q6ZN28 852 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 HID1Q8IV36 788 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 UMODL1-AS1Q8N2C9 162 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 HCAR2Q8TDS4 363 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 TSACCQ96A04 125 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 GRAMD1AQ96CP6 724 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 PRR11Q96HE9 360 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 TBATAQ96M53 351 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 SLC46A1Q96NT5 459 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 MCEEQ96PE7 176 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 NCAPGQ9BPX3 1015 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 CNPY3Q9BT09 278 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 DPH1Q9BZG8 443 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 KIF26BQ2KJY2 2108 aa13.52□□□□□ -0.25
POLR2J3-219ENST00000608621 COL27A1Q8IZC6 1860 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 J3KR12 359 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 TCEA3O75764 348 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 CTSEP14091 401 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 PEX5P50542 639 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 BLKP51451 505 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 SUOXP51687 545 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 HK3P52790 923 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 UCNP55089 124 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 UBXN1Q04323 297 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 ELP6Q0PNE2 266 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 UGP2Q16851 508 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 WSCD2Q2TBF2 565 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 ACAD10Q6JQN1 1059 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 DCUN1D2Q6PH85 259 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 RD3Q7Z3Z2 195 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 MCOLN2Q8IZK6 566 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 ANKRD20A12PQ8NF67 263 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 NAT6Q93015 286 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 APOOQ9BUR5 198 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 DOLKQ9UPQ8 538 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 MGAQ8IWI9 3026 aa13.51□□□□□ -0.25
POLR2J3-219ENST00000608621 HELZ2Q9BYK8 2649 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 PMS2P1A4D2B8 440 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 LRRC10BA6NIK2 292 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 C6P13671 934 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 CDK11BP21127 795 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 LIG3P49916 1009 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 AIF1P55008 147 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 TPI1P60174 286 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 OGDHQ02218 1023 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 CFHR1Q03591 330 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 INPP5AQ14642 412 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 GRM3Q14832 879 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 ELOCQ15369 112 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 TCEA2Q15560 299 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 ALG11Q2TAA5 492 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 TAF1BQ53T94 588 aaPredicted RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 CAMK1DQ8IU85 385 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 ZNF843Q8N446 348 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 WDR36Q8NI36 951 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 WDR48Q8TAF3 677 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 CELF6Q96J87 481 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 ERGIC2Q96RQ1 377 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 SLC39A8Q9C0K1 460 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 SYNDIG1Q9H7V2 258 aa13.5□□□□□ -0.25
POLR2J3-219ENST00000608621 PDFQ9HBH1 243 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms