RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RCOR2Q8IZ40 523 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SPARTQ8N0X7 666 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SIX6OS1Q8N1H7 587 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 LSMEM1Q8N8F7 131 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ANKFN1Q8N957 763 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC43A3Q8NBI5 491 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SIMC1Q8NDZ2 872 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF564Q8TBZ8 553 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GIPC2Q8TF65 315 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TFB1MQ8WVM0 346 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPA5Q8WXQ8 436 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 HSPH1Q92598 858 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TFAP2CQ92754 450 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CELF1Q92879 486 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZUFSPQ96AP4 578 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TAMM41Q96BW9 452 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 RMDN1Q96DB5 314 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 RMND5BQ96G75 393 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF486Q96H40 463 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SH3YL1Q96HL8 342 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 FEM1CQ96JP0 617 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNDP1Q96KN2 507 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNBD2Q96M20 576 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 COG8Q96MW5 612 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACAP3Q96P50 834 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPR101Q96P66 508 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 WRNIP1Q96S55 665 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 DHRS9Q9BPW9 319 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NPLQ9BXD5 320 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC13A1Q9BZW2 595 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 OR2B2Q9GZK3 357 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 WDR12Q9GZL7 423 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NYXQ9GZU5 481 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GLT8D2Q9H1C3 349 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 RIOX1Q9H6W3 641 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NANOGQ9H9S0 305 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PCDH9Q9HC56 1237 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 IL17RBQ9NRM6 502 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRGBPQ9NV56 204 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TAS2R14Q9NYV8 317 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPRC5DQ9NZD1 345 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NPAP1Q9NZP6 1156 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 GCNT4Q9P109 453 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARMCX1Q9P291 453 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 KCNN3Q9UGI6 736 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 NOCTQ9UK39 431 aaKnown RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PSME2Q9UL46 239 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PCDHGB4Q9UN71 923 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ATP11BQ9Y2G3 1177 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 TCAF1Q9Y4C2 921 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 PCDHGB5Q9Y5G0 923 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 BACE2Q9Y5Z0 518 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLUHO75153 1309 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MN1Q10571 1320 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 CACNA1SQ13698 1873 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ATRNL1Q5VV63 1379 aa4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF142P52746 1687 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAST2Q6P0Q8 1798 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 RBBP6Q7Z6E9 1792 aaKnown RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 RGPD5Q99666 1765 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARHGEF37A1IGU5 675 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 WDR91A4D1P6 747 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 C7orf72A4D263 438 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 RGSL1A5PLK6 1076 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 MROH6A6NGR9 719 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 EVPLLA8MZ36 301 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF195O14628 629 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 TBX3O15119 743 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 BET1O15155 118 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 TEX28O15482 410 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 TGFB1I1O43294 461 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 MSI1O43347 362 aaKnown RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 AKAP10O43572 662 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 LIASO43766 372 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZC3H11AO75152 810 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 SEC14L2O76054 403 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 PROSCO94903 275 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPNE6O95741 557 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 BCL10O95999 233 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 SNRPAP09012 282 aaKnown RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 ENO2P09104 434 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 TFPTP0C1Z6 253 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 MCF2P10911 925 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRT3P12035 628 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 NAGAP17050 411 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 POLR2CP19387 275 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCNA2P20248 432 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRKACBP22694 351 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 ME2P23368 584 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 GRK2P25098 689 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNTFP26441 200 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 PKLRP30613 574 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 CPA2P48052 419 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 HARS2P49590 506 aaKnown RBP4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 AQP5P55064 265 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 P2RX3P56373 397 aa4.12□□□□□ -1.75
HMGB1P50-201ENST00000605814 NLRP11P59045 1033 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms