RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 TP53I13Q8NBR0 393 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ZNF641Q96N77 438 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 TUBGCP5Q96RT8 1024 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 NUP85Q9BW27 656 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ATP13A3Q9H7F0 1226 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 MBNL1Q9NR56 388 aaKnown RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ETNK2Q9NVF9 386 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 NLGN3Q9NZ94 848 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 KLF15Q9UIH9 416 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 COQ6Q9Y2Z9 468 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 NEMP2A6NFY4 417 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 SCAMP1O15126 338 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 CYP1A2P05177 515 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 RARAP10276 462 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 MYF5P13349 255 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 C6P13671 934 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 JUNDP17535 347 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 AMPD1P23109 780 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 SERPINA4P29622 427 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 CASP14P31944 242 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 THOP1P52888 689 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 SEMG2Q02383 582 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 SLC25A11Q02978 314 aaKnown RBP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 CYP4F3Q08477 520 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 EIF2B5Q13144 721 aaKnown RBP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 TARDBPQ13148 414 aaKnown RBP eCLIP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 IRF4Q15306 451 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 BOLA3Q53S33 107 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 CCDC122Q5T0U0 273 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 ALKBH5Q6P6C2 394 aaKnown RBP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 POLNQ7Z5Q5 900 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 SRLQ86TD4 932 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 LZTR1Q8N653 840 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 HCAR2Q8TDS4 363 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 CSPG4P5Q96PW8 444 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 XPO4Q9C0E2 1151 aaKnown RBP16.52■□□□□ 0.24
TUBE1-206ENST00000603722 IP6K2Q9UHH9 426 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 RAXQ9Y2V3 346 aa16.52■□□□□ 0.24
TUBE1-206ENST00000603722 K7ESM1 405 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
TUBE1-206ENST00000603722 MUSKO15146 869 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 TPM3P06753 285 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 MMP12P39900 470 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 CSNK1DP48730 415 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 INSM1Q01101 510 aaPredicted RBP16.51■□□□□ 0.23
TUBE1-206ENST00000603722 BCL2L1Q07817 233 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 LBRQ14739 615 aaKnown RBP16.51■□□□□ 0.23
TUBE1-206ENST00000603722 TMCO4Q5TGY1 634 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 RBFAQ8N0V3 343 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 PAF1Q8N7H5 531 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 LMX1AQ8TE12 382 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 APOLD1Q96LR9 279 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 DUSP23Q9BVJ7 150 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 PCDH18Q9HCL0 1135 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 SEPT3Q9UH03 358 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 APOBEC3BQ9UH17 382 aaKnown RBP16.51■□□□□ 0.23
TUBE1-206ENST00000603722 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 CELSR3Q9NYQ7 3312 aa16.51■□□□□ 0.23
TUBE1-206ENST00000603722 AQP9O43315 295 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 CKMT1AP12532 417 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 SSR1P43307 286 aaKnown RBP16.5■□□□□ 0.23
TUBE1-206ENST00000603722 LIG3P49916 1009 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 SCNN1BP51168 640 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 YPEL5P62699 121 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 SLC10A7Q0GE19 358 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 PTK2BQ14289 1009 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 KRT81Q14533 505 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 ZNF235Q14590 738 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 LRRC14Q15048 493 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 WSCD2Q2TBF2 565 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 DEFB133Q30KQ1 61 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 MACC1Q6ZN28 852 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 PHACTR4Q8IZ21 702 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 ZNF564Q8TBZ8 553 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-206ENST00000603722 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 PSKH2Q96QS6 385 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 TCEAL2Q9H3H9 227 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-206ENST00000603722 DKK4Q9UBT3 224 aa16.5■□□□□ 0.23
TUBE1-206ENST00000603722 PNMA8BQ9ULN7 279 aaPredicted RBP16.5■□□□□ 0.23
TUBE1-206ENST00000603722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.5■□□□□ 0.23
TUBE1-206ENST00000603722 LY6G6EA0A0G2JKS1 128 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 TTC24A2A3L6 582 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-206ENST00000603722 MYO1FO00160 1098 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 LZTS3O60299 673 aaPredicted RBP16.49■□□□□ 0.23
TUBE1-206ENST00000603722 PCCBP05166 539 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 EIF4A3P38919 411 aaKnown RBP16.49■□□□□ 0.23
TUBE1-206ENST00000603722 CDH6P55285 790 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 AP1S1P61966 158 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 NSUN2Q08J23 767 aaKnown RBP eCLIP16.49■□□□□ 0.23
TUBE1-206ENST00000603722 ZCCHC8Q6NZY4 707 aaKnown RBP16.49■□□□□ 0.23
TUBE1-206ENST00000603722 ATPAF2Q8N5M1 289 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
TUBE1-206ENST00000603722 BTN2A2Q8WVV5 523 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms