RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 BMFQ96LC9 184 aa22.09■■□□□ 1.13
PPFIA3-208ENST00000602726 ANP32EQ9BTT0 268 aa22.09■■□□□ 1.13
PPFIA3-208ENST00000602726 WRAP53Q9BUR4 548 aaKnown RBP22.09■■□□□ 1.13
PPFIA3-208ENST00000602726 C1QTNF7Q9BXJ2 289 aa22.09■■□□□ 1.13
PPFIA3-208ENST00000602726 PCDH12Q9NPG4 1184 aa22.09■■□□□ 1.13
PPFIA3-208ENST00000602726 POM121BA6NF01 834 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 TM7SF2O76062 418 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 TOP3BO95985 862 aaKnown RBP22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 PEX11BO96011 259 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 BNIP3Q12983 259 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 MARC1Q5VT66 337 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 NCBP2-AS2Q69YL0 99 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 KYAT3Q6YP21 454 aaKnown RBP22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 DENND6BQ8NEG7 585 aa22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 KLF6Q99612 283 aaPredicted RBP22.08■■□□□ 1.13
PPFIA3-208ENST00000602726 TNFSF14O43557 240 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 HYAL3O43820 417 aaPredicted RBP22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 MFSD11O43934 449 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 SPINK2P20155 84 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 MAGEA1P43355 309 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 RABIFP47224 123 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 PAFAH1B3Q15102 231 aaKnown RBP22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 TMEM52BQ4KMG9 183 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 PNPLA1Q8N8W4 532 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 CNTNAP3BQ96NU0 1288 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 SCNM1Q9BWG6 230 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 CNTNAP3Q9BZ76 1288 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 FTSJ1Q9UET6 329 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 WASF3Q9UPY6 502 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 ATP8A1Q9Y2Q0 1164 aa22.07■■□□□ 1.12
PPFIA3-208ENST00000602726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 GOLGA8CPA6NN73 597 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 RIOK3O14730 519 aaKnown RBP22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 ATXN1LP0C7T5 689 aaKnown RBP22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 KDELR1P24390 212 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 MMP13P45452 471 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 POLR2LP62875 67 aaKnown RBP22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 GALNT2Q10471 571 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 TCEAL1Q15170 157 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 ZSWIM9Q86XI8 627 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 GAS2L3Q86XJ1 694 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 CCDC170Q8IYT3 715 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 SLC22A18ASQ8N1D0 253 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 CHCHD4Q8N4Q1 142 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 EID2Q8N6I1 236 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 RAPGEF5Q92565 580 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 FAF2Q96CS3 445 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 ECHDC3Q96DC8 303 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 NUDCD1Q96RS6 583 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 SCUBE2Q9NQ36 999 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 SHROOM3Q8TF72 1996 aa22.06■■□□□ 1.12
PPFIA3-208ENST00000602726 TTC24A2A3L6 582 aaPredicted RBP22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 LRRD1A4D1F6 860 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 SDC3O75056 442 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 PRKCGP05129 697 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 CYLC1P35663 651 aaPredicted RBP22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 GARSP41250 739 aaKnown RBP22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 SLC1A1P43005 524 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 NOP2P46087 812 aaKnown RBP22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 SPA17Q15506 151 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 ODF2Q5BJF6 829 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 SLCO6A1Q86UG4 719 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 PGBD5Q8N414 524 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 CENPTQ96BT3 561 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 PANX2Q96RD6 677 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 MGME1Q9BQP7 344 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 LUC7LQ9NQ29 371 aaKnown RBP22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 ANKRD36A6QL64 1941 aa22.05■■□□□ 1.12
PPFIA3-208ENST00000602726 TRAFD1O14545 582 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 MAP3K6O95382 1288 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 LDOC1O95751 146 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 MX2P20592 715 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 MMP12P39900 470 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 LIG3P49916 1009 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 MAXP61244 160 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 PDE1CQ14123 709 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 IFI16Q16666 785 aaKnown RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 LRRC38Q5VT99 294 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 TIGD7Q6NT04 549 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 RAB44Q7Z6P3 723 aaPredicted RBP22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 PQLC3Q8N755 202 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 ADAMTS14Q8WXS8 1223 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 IFT43Q96FT9 208 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 NSMCE3Q96MG7 304 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 RNF157Q96PX1 679 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 NOD2Q9HC29 1040 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 NT5MQ9NPB1 228 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 GPR27Q9NS67 375 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 DNAJC28Q9NX36 388 aa22.04■■□□□ 1.12
PPFIA3-208ENST00000602726 SPTY2D1-AS1A0A0U1RR47 76 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 SPOPO43791 374 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 LZTS3O60299 673 aaPredicted RBP22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 SOCS5O75159 536 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 LCA5LO95447 670 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 C6P13671 934 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 TNNT1P13805 278 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 CR2P20023 1033 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 PFN3P60673 137 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 SEMG2Q02383 582 aa22.03■■□□□ 1.12
PPFIA3-208ENST00000602726 GBE1Q04446 702 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms