RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 FAM72BQ86X60 149 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 UMODL1-AS1Q8N2C9 162 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 OR6K2Q8NGY2 324 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 SLC30A5Q8TAD4 765 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 SLC20A1Q8WUM9 679 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 VCPIP1Q96JH7 1222 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 EIF3CQ99613 913 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 SATB2Q9UPW6 733 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 ENTPD2Q9Y5L3 495 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 ACTL7AQ9Y615 435 aa18.02■□□□□ 0.48
SHKBP1-227ENST00000602011 MMP20O60882 483 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 CTSEP14091 401 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 ZNF143P52747 638 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 C1QBPQ07021 282 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 PTP4A2Q12974 167 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 SERINC3Q13530 473 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 SPIDRQ14159 915 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 ERAP2Q6P179 960 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 BRAT1Q6PJG6 821 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 WDR59Q6PJI9 974 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 GKN2Q86XP6 184 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 DNAAF5Q86Y56 855 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 ARL10Q8N8L6 244 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 TP53I13Q8NBR0 393 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 JOSD2Q8TAC2 188 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 VPS16Q9H269 839 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 SUV39H2Q9H5I1 410 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 FAM207AQ9NSI2 230 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 TAB2Q9NYJ8 693 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 NEU3Q9UQ49 428 aa18.01■□□□□ 0.47
SHKBP1-227ENST00000602011 CCDC187A0A096LP49 1063 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CDRT15L2A8MXV6 281 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 MUSKO15146 869 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 GCATO75600 419 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 RASGRP1O95267 797 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 TSHRP16473 764 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 IGFALSP35858 605 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CSNK1DP48730 415 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 HK3P52790 923 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 NDST2P52849 883 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 LY6DQ14210 128 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 UGP2Q16851 508 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CLEC16AQ2KHT3 1053 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 C3orf38Q5JPI3 329 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 ATXN7L2Q5T6C5 722 aaPredicted RBP18■□□□□ 0.47
SHKBP1-227ENST00000602011 CDKAL1Q5VV42 579 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 XKR5Q6UX68 686 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CLEC14AQ86T13 490 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 SLC35F3Q8IY50 421 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CCDC185Q8N715 623 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 ATXN7L3BQ96GX2 97 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 LIN37Q96GY3 246 aaPredicted RBP18■□□□□ 0.47
SHKBP1-227ENST00000602011 TUBGCP5Q96RT8 1024 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 NCAPGQ9BPX3 1015 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 CNPY3Q9BT09 278 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 LRRC61Q9BV99 259 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 EDEM3Q9BZQ6 932 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 GGT7Q9UJ14 662 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 ITM2BQ9Y287 266 aa18■□□□□ 0.47
SHKBP1-227ENST00000602011 A0A1W2PNU3 283 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 TSPAN11A1L157 253 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 PMS2P1A4D2B8 440 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 RASA4BC9J798 803 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 J3QKU1 62 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 NTN3O00634 580 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 CASC3O15234 703 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 RASA4O43374 803 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 ITGA2BP08514 1039 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 POLR2LP62875 67 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 KRT31Q15323 416 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 TPRG1LQ5T0D9 272 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 SCYL2Q6P3W7 929 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 NEK11Q8NG66 645 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 HMCESQ96FZ2 354 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 CCDC3Q9BQI4 270 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 STRADBQ9C0K7 418 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 NOL6Q9H6R4 1146 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 NLRC4Q9NPP4 1024 aa17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 UBA2Q9UBT2 640 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-227ENST00000602011 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 K7ENP7 123 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 HOXC4P09017 264 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 KELP23276 732 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 C1orf61Q13536 156 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 NFATC4Q14934 902 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 RAB6CQ53S08 254 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 DNAJC24Q6P3W2 148 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 INO80CQ6PI98 192 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 CRTC1Q6UUV9 634 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 RBFAQ8N0V3 343 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 TMEM159Q96B96 161 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 PRR11Q96HE9 360 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 TMEM74Q96NL1 305 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 CLPBQ9H078 707 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 RAB6CQ9H0N0 254 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 MBNL1Q9NR56 388 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 KCTD5Q9NXV2 234 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms