RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 KLK6Q92876 244 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 FERMT1Q9BQL6 677 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 MGME1Q9BQP7 344 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 ORAI3Q9BRQ5 295 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 EBF2Q9HAK2 575 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 NT5MQ9NPB1 228 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 TM7SF3Q9NS93 570 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 RBM22Q9NW64 420 aaKnown RBP eCLIP19.54■□□□□ 0.72
UPF1-212ENST00000601689 TFR2Q9UP52 801 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 SNX11Q9Y5W9 270 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 HS3ST3A1Q9Y663 406 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 DMXL1Q9Y485 3027 aa19.54■□□□□ 0.72
UPF1-212ENST00000601689 GOLGA6L3A6NEY3 463 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 FPGTO14772 594 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 ARHGAP6O43182 974 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 KRT86O43790 486 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 PTMAP06454 111 aaKnown RBP19.53■□□□□ 0.72
UPF1-212ENST00000601689 CCNB1P14635 433 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 TIMP2P16035 220 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 CSRP1P21291 193 aaKnown RBP19.53■□□□□ 0.72
UPF1-212ENST00000601689 ABL2P42684 1182 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 COPS2P61201 443 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 GBE1Q04446 702 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 AP1B1Q10567 949 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 CCDC181Q5TID7 509 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 KAZNQ674X7 775 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 SEL1L3Q68CR1 1132 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 TEX26Q8N6G2 289 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 DENND6BQ8NEG7 585 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 EXD1Q8NHP7 514 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 DTLQ9NZJ0 730 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 ATP8A1Q9Y2Q0 1164 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 PCDHGB2Q9Y5G2 931 aa19.53■□□□□ 0.72
UPF1-212ENST00000601689 ASCC3Q8N3C0 2202 aaKnown RBP19.53■□□□□ 0.72
UPF1-212ENST00000601689 TP53BP1Q12888 1972 aaPredicted RBP19.52■□□□□ 0.72
UPF1-212ENST00000601689 TSPAN11A1L157 253 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 IGLON5A6NGN9 336 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 A6NNZ2 444 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 C10orf142B7Z368 130 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 RNF103O00237 685 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 AREL1O15033 823 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 MAP3K6O95382 1288 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 CEACAM1P13688 526 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 PRLRP16471 622 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 TGM2P21980 687 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 CTSKP43235 329 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 RGRP47804 291 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 NOVA1P51513 510 aaKnown RBP19.52■□□□□ 0.72
UPF1-212ENST00000601689 DYNLT1P63172 113 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 FAM193AP78312 1265 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 TMEM259Q4ZIN3 620 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 PPM1JQ5JR12 505 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 ARMC12Q5T9G4 340 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 MFSD7Q6UXD7 560 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 SPOCD1Q6ZMY3 1216 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 TMEM139Q8IV31 216 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 UBL4BQ8N7F7 174 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 MAML1Q92585 1016 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 P3H4Q92791 437 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 LENG8Q96PV6 779 aaPredicted RBP19.52■□□□□ 0.72
UPF1-212ENST00000601689 ELF4Q99607 663 aaPredicted RBP19.52■□□□□ 0.72
UPF1-212ENST00000601689 MYOCQ99972 504 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 ERVMER34-1Q9H9K5 563 aa19.52■□□□□ 0.72
UPF1-212ENST00000601689 ZFR2Q9UPR6 939 aaKnown RBP19.52■□□□□ 0.72
UPF1-212ENST00000601689 SPTBN4Q9H254 2564 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 A0A1W2PR77 199 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 MACROD2A1Z1Q3 448 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 C3orf70A6NLC5 250 aaPredicted RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 TM4SF5O14894 197 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 LZTS3O60299 673 aaPredicted RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 CST8O60676 142 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 PEX11BO96011 259 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 THEGLP0DJG4 465 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 CYP2A6P11509 494 aaPredicted RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 CDKN2BP42772 138 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 RWDD2BP57060 319 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 MAXP61244 160 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 PPIDQ08752 370 aaKnown RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 TMEM52BQ4KMG9 183 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 PEX26Q7Z412 305 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 RNF10Q8N5U6 811 aaKnown RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 PLD5Q8N7P1 536 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 SETD7Q8WTS6 366 aaKnown RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 SEMA3CQ99985 751 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 C1QTNF2Q9BXJ5 285 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 GOLPH3Q9H4A6 298 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 PCDH12Q9NPG4 1184 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 PHTF1Q9UMS5 762 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 REXO2Q9Y3B8 237 aaKnown RBP19.51■□□□□ 0.71
UPF1-212ENST00000601689 PCDHA3Q9Y5H8 950 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 TMEM131Q92545 1883 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 KNL1Q8NG31 2342 aa19.51■□□□□ 0.71
UPF1-212ENST00000601689 CFAP69A5D8W1 941 aa19.5■□□□□ 0.71
UPF1-212ENST00000601689 RCCD1A6NED2 376 aa19.5■□□□□ 0.71
UPF1-212ENST00000601689 TOR1BO14657 336 aa19.5■□□□□ 0.71
UPF1-212ENST00000601689 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
UPF1-212ENST00000601689 MUSKO15146 869 aa19.5■□□□□ 0.71
UPF1-212ENST00000601689 FLRT2O43155 660 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms