RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 BBS2Q9BXC9 721 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 PCMTD2Q9NV79 361 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 RRP15Q9Y3B9 282 aaKnown RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 FSHRP23945 695 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 CHRNA4P43681 627 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 IHHQ14623 411 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 HSP90AA5PQ58FG0 334 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 KIAA0408Q6ZU52 694 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 SPATA21Q7Z572 469 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 SRLQ86TD4 932 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 APCDD1Q8J025 514 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 ITFG1Q8TB96 612 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 FAM111AQ96PZ2 611 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 TDRD1Q9BXT4 1180 aaKnown RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 NSUN3Q9H649 340 aaKnown RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 LHX3Q9UBR4 397 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
PNKP-214ENST00000600573 PSAT1Q9Y617 370 aa20.2■□□□□ 0.82
PNKP-214ENST00000600573 HELZP42694 1942 aaKnown RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 CRTAMO95727 393 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 ITGA2BP08514 1039 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 HOXB8P17481 243 aaPredicted RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 ETV4P43268 484 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 ARCN1P48444 511 aaKnown RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 RPL26P61254 145 aaKnown RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 PDE1BQ01064 536 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 IFT88Q13099 833 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 THOC5Q13769 683 aaKnown RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 PITRM1Q5JRX3 1037 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 LINGO4Q6UY18 593 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 EFHBQ8N7U6 833 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 C12orf76Q8N812 135 aaPredicted RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.19■□□□□ 0.82
PNKP-214ENST00000600573 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 SPOCK2Q92563 424 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 BHMTQ93088 406 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 E2F7Q96AV8 911 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 TIFAQ96CG3 184 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 RBBP8Q99708 897 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 PLCD4Q9BRC7 762 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 CEP44Q9C0F1 390 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 TRPV4Q9HBA0 871 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 PLK2Q9NYY3 685 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 RPL26L1Q9UNX3 145 aaKnown RBP20.19■□□□□ 0.82
PNKP-214ENST00000600573 RAI2Q9Y5P3 530 aa20.19■□□□□ 0.82
PNKP-214ENST00000600573 GBF1Q92538 1859 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 SLC7A4O43246 635 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 TYRP14679 529 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 CD70P32970 193 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 CRHR1P34998 444 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 RGRP47804 291 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 SEPT6Q14141 434 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 CNGA3Q16281 694 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 ESRP1Q6NXG1 681 aaKnown RBP20.18■□□□□ 0.82
PNKP-214ENST00000600573 STRA8Q7Z7C7 330 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 TDHQ8IZJ6 230 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 NDUFAF2Q8N183 169 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 ZNF75CPQ92670 426 aaPredicted RBP20.18■□□□□ 0.82
PNKP-214ENST00000600573 SMARCD2Q92925 531 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 ATP2A3Q93084 1043 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 PITPNM3Q9BZ71 974 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 IARS2Q9NSE4 1012 aaKnown RBP20.18■□□□□ 0.82
PNKP-214ENST00000600573 IL1RAPL1Q9NZN1 696 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 HACD3Q9P035 362 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 SLC25A13Q9UJS0 675 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 PRDM4Q9UKN5 801 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 HS3ST2Q9Y278 367 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 PLLPQ9Y342 182 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 ACTL7AQ9Y615 435 aa20.18■□□□□ 0.82
PNKP-214ENST00000600573 TTC24A2A3L6 582 aaPredicted RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 NEDD8-MDP1E9PL57 170 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 PABPC1P11940 636 aaKnown RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 SERPINB8P50452 374 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 LIMK2P53671 638 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 ACVR1Q04771 509 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 CBX2Q14781 532 aaPredicted RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 CCDC121Q6ZUS5 278 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 FAM47EQ6ZV65 393 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 KIAA0907Q7Z7F0 614 aaPredicted RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 GALNT7Q86SF2 657 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 RIN3Q8TB24 985 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 STYXQ8WUJ0 223 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 SCG3Q8WXD2 468 aaKnown RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 ING5Q8WYH8 240 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 LINC00597Q9H2U6 94 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 DUS2Q9NX74 493 aaKnown RBP20.17■□□□□ 0.82
PNKP-214ENST00000600573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.17■□□□□ 0.82
PNKP-214ENST00000600573 LMCD1Q9NZU5 365 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 STARD13Q9Y3M8 1113 aa20.17■□□□□ 0.82
PNKP-214ENST00000600573 TPP1O14773 563 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 EDF1O60869 148 aaKnown RBP20.16■□□□□ 0.82
PNKP-214ENST00000600573 GLRA3O75311 464 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 VAPBO95292 243 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 IGSF6O95976 241 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 ADH1CP00326 375 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 HLA-FP30511 346 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 SERPINB4P48594 390 aa20.16■□□□□ 0.82
PNKP-214ENST00000600573 VASPP50552 380 aaPredicted RBP20.16■□□□□ 0.82
PNKP-214ENST00000600573 SNRPD1P62314 119 aaKnown RBP20.16■□□□□ 0.82
PNKP-214ENST00000600573 SMAD1Q15797 465 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms