RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ZNF548Q8NEK5 533 aaPredicted RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 EXOC2Q96KP1 924 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 APOLD1Q96LR9 279 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 SCUBE2Q9NQ36 999 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 CWC15Q9P013 229 aaKnown RBP15.96■□□□□ 0.15
VRK3-221ENST00000600284 MYO1AQ9UBC5 1043 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 SALL4Q9UJQ4 1053 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 LHX6Q9UPM6 363 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 CLCA2Q9UQC9 943 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 RAXQ9Y2V3 346 aa15.96■□□□□ 0.15
VRK3-221ENST00000600284 PKD1L2Q7Z442 2459 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 CFAP69A5D8W1 941 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 TMEM110-MUSTN1A8MSY1 372 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 AQP9O43315 295 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 BUB1BO60566 1050 aaPredicted RBP15.95■□□□□ 0.14
VRK3-221ENST00000600284 PIGNO95427 931 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 SERPING1P05155 500 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 JUNDP17535 347 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 IGFALSP35858 605 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 PEX5P50542 639 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 RENBPP51606 427 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 ZBED6P86452 979 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 EIF2B5Q13144 721 aaKnown RBP15.95■□□□□ 0.14
VRK3-221ENST00000600284 DPYSQ14117 519 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 DPYSL2Q16555 572 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 TDRD12Q587J7 1177 aaKnown RBP15.95■□□□□ 0.14
VRK3-221ENST00000600284 LRRC73Q5JTD7 316 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 CFAP58Q5T655 872 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 TMCO4Q5TGY1 634 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 ZCCHC8Q6NZY4 707 aaKnown RBP15.95■□□□□ 0.14
VRK3-221ENST00000600284 SRLQ86TD4 932 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 LUZP1Q86V48 1076 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 ZNF599Q96NL3 588 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.95■□□□□ 0.14
VRK3-221ENST00000600284 CINPQ9BW66 212 aaPredicted RBP15.95■□□□□ 0.14
VRK3-221ENST00000600284 ATP13A3Q9H7F0 1226 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 SP110Q9HB58 689 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 SPASTQ9UBP0 616 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 KLF15Q9UIH9 416 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
VRK3-221ENST00000600284 FAM208BQ5VWN6 2430 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 H3BRJ5 948 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 DFFAO00273 331 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 MT-CO3P00414 261 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 ITIH2P19823 946 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 PTMSP20962 102 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 SERPINA4P29622 427 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 ARL4AP40617 200 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 CLDN6P56747 220 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 POLR2LP62875 67 aaKnown RBP15.94■□□□□ 0.14
VRK3-221ENST00000600284 LRRC14Q15048 493 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 TPRG1LQ5T0D9 272 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 MACC1Q6ZN28 852 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 CAMK1DQ8IU85 385 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 NIPA2Q8N8Q9 360 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 TSEN2Q8NCE0 465 aaKnown RBP15.94■□□□□ 0.14
VRK3-221ENST00000600284 ECHDC3Q96DC8 303 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 PSKH2Q96QS6 385 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 WRAP53Q9BUR4 548 aaKnown RBP15.94■□□□□ 0.14
VRK3-221ENST00000600284 PCDH12Q9NPG4 1184 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 MBNL1Q9NR56 388 aaKnown RBP15.94■□□□□ 0.14
VRK3-221ENST00000600284 ANKRD11Q6UB99 2663 aaPredicted RBP15.94■□□□□ 0.14
VRK3-221ENST00000600284 ACACAQ13085 2346 aa15.94■□□□□ 0.14
VRK3-221ENST00000600284 LAMA5O15230 3695 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 A0A087WV48 116 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 LY6G6EA0A0G2JKS1 128 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 NEBLO76041 1014 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 C6P13671 934 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 IL1R2P27930 398 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 EIF4A3P38919 411 aaKnown RBP15.93■□□□□ 0.14
VRK3-221ENST00000600284 MMP12P39900 470 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 RGRP47804 291 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 BLKP51451 505 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 BCL2L1Q07817 233 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 CDCP2Q5VXM1 449 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 POLNQ7Z5Q5 900 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 PHACTR4Q8IZ21 702 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 NPWQ8N729 165 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 LMX1AQ8TE12 382 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 TEKT4Q8WW24 435 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 GLMNQ92990 594 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 IL12RB2Q99665 862 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 SLC13A1Q9BZW2 595 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 SEPT3Q9UH03 358 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 APOBEC3BQ9UH17 382 aaKnown RBP15.93■□□□□ 0.14
VRK3-221ENST00000600284 IP6K2Q9UHH9 426 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 ATP8A1Q9Y2Q0 1164 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 LUC7L2Q9Y383 392 aaKnown RBP15.93■□□□□ 0.14
VRK3-221ENST00000600284 AK5Q9Y6K8 562 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 U3KQA8 63 aa15.93■□□□□ 0.14
VRK3-221ENST00000600284 TDRD6O60522 2096 aaKnown RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 A0A1W2PQ67 120 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 EME2A4GXA9 379 aaPredicted RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 OPA1O60313 960 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 CYP1A2P05177 515 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 HTR1BP28222 390 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 HSPA9P38646 679 aaKnown RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 LIG3P49916 1009 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 AP1S1P61966 158 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms