RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 BRAT1Q6PJG6 821 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 KYAT3Q6YP21 454 aaKnown RBP22.81■■□□□ 1.24
CCDC9-204ENST00000599398 MAP7D3Q8IWC1 876 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 BBS5Q8N3I7 341 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 EID2Q8N6I1 236 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 FAM71BQ8TC56 605 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 LENG8Q96PV6 779 aaPredicted RBP22.81■■□□□ 1.24
CCDC9-204ENST00000599398 PSKH2Q96QS6 385 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 PCDH12Q9NPG4 1184 aa22.81■■□□□ 1.24
CCDC9-204ENST00000599398 MAP1BP46821 2468 aaKnown RBP22.8■■□□□ 1.24
CCDC9-204ENST00000599398 TSPAN11A1L157 253 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 MAFKO60675 156 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 ANKRD20A8PQ5CZ79 823 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 DCP2Q8IU60 420 aaKnown RBP22.8■■□□□ 1.24
CCDC9-204ENST00000599398 RHOT2Q8IXI1 618 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 SLC22A18ASQ8N1D0 253 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 DENND6BQ8NEG7 585 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 ASB12Q8WXK4 309 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 KLF6Q99612 283 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-204ENST00000599398 ZNF670Q9BS34 389 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 C1QTNF7Q9BXJ2 289 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 RBSNQ9H1K0 784 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 KLK13Q9UKR3 277 aa22.8■■□□□ 1.24
CCDC9-204ENST00000599398 ARID1BQ8NFD5 2236 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-204ENST00000599398 LRRK1Q38SD2 2015 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 TTC24A2A3L6 582 aaPredicted RBP22.79■■□□□ 1.24
CCDC9-204ENST00000599398 MFSD11O43934 449 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 LDOC1O95751 146 aaPredicted RBP22.79■■□□□ 1.24
CCDC9-204ENST00000599398 PRKCGP05129 697 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 RABIFP47224 123 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 AP1S1P61966 158 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 TMEM52BQ4KMG9 183 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 NCBP2-AS2Q69YL0 99 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 RAB44Q7Z6P3 723 aaPredicted RBP22.79■■□□□ 1.24
CCDC9-204ENST00000599398 ZSWIM9Q86XI8 627 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 TC2NQ8N9U0 490 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 PCDH19Q8TAB3 1148 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 ADAMTS14Q8WXS8 1223 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 RFFLQ8WZ73 363 aa22.79■■□□□ 1.24
CCDC9-204ENST00000599398 CNDP2Q96KP4 475 aaKnown RBP22.79■■□□□ 1.24
CCDC9-204ENST00000599398 PEX11BO96011 259 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 HSPA9P38646 679 aaKnown RBP22.78■■□□□ 1.24
CCDC9-204ENST00000599398 ARHGAP25P42331 645 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 SEMG2Q02383 582 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 ZNF542PQ5EBM4 170 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 MARC1Q5VT66 337 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 ANP32EQ9BTT0 268 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 SCUBE2Q9NQ36 999 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 DNAJC28Q9NX36 388 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 TOR4AQ9NXH8 423 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 ATP8A1Q9Y2Q0 1164 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 COQ6Q9Y2Z9 468 aa22.78■■□□□ 1.24
CCDC9-204ENST00000599398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.77■■□□□ 1.24
CCDC9-204ENST00000599398 ENC1O14682 589 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 RIOK3O14730 519 aaKnown RBP22.77■■□□□ 1.24
CCDC9-204ENST00000599398 MAP3K6O95382 1288 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 MMP13P45452 471 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 ZNF75DP51815 510 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 PDE1CQ14123 709 aaPredicted RBP22.77■■□□□ 1.24
CCDC9-204ENST00000599398 PAFAH1B3Q15102 231 aaKnown RBP22.77■■□□□ 1.24
CCDC9-204ENST00000599398 KDM7AQ6ZMT4 941 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 LRRC49Q8IUZ0 686 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 CENPTQ96BT3 561 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 INTUQ9ULD6 942 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 NEUROG3Q9Y4Z2 214 aa22.77■■□□□ 1.24
CCDC9-204ENST00000599398 COL5A1P20908 1838 aaPredicted RBP22.77■■□□□ 1.24
CCDC9-204ENST00000599398 FRYQ5TBA9 3013 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 LRRD1A4D1F6 860 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 MTA2O94776 668 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 C6P13671 934 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 KDELR1P24390 212 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 IGFALSP35858 605 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 MMP12P39900 470 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 GARSP41250 739 aaKnown RBP22.76■■□□□ 1.23
CCDC9-204ENST00000599398 MAXP61244 160 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 POLR2LP62875 67 aaKnown RBP22.76■■□□□ 1.23
CCDC9-204ENST00000599398 KANSL1Q7Z3B3 1105 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 PGBD5Q8N414 524 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 PDCD6IPQ8WUM4 868 aaKnown RBP22.76■■□□□ 1.23
CCDC9-204ENST00000599398 RAPGEF5Q92565 580 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 ECHDC3Q96DC8 303 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 IFT43Q96FT9 208 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 NSMCE3Q96MG7 304 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 NUDCD1Q96RS6 583 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 MGME1Q9BQP7 344 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 NT5MQ9NPB1 228 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 PCDHGC4Q9Y5F7 938 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 EPG5Q9HCE0 2579 aa22.76■■□□□ 1.23
CCDC9-204ENST00000599398 GOLGA4Q13439 2230 aaKnown RBP22.76■■□□□ 1.23
CCDC9-204ENST00000599398 SPTY2D1-AS1A0A0U1RR47 76 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 TRAFD1O14545 582 aaPredicted RBP22.75■■□□□ 1.23
CCDC9-204ENST00000599398 LZTS3O60299 673 aaPredicted RBP22.75■■□□□ 1.23
CCDC9-204ENST00000599398 TNNT1P13805 278 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 DGKAP23743 735 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 MAGEA1P43355 309 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 LIG3P49916 1009 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 THOP1P52888 689 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 PFN3P60673 137 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 GALNT2Q10471 571 aa22.75■■□□□ 1.23
CCDC9-204ENST00000599398 DNAJC3Q13217 504 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms