RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 AGBL4Q5VU57 503 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 DARS2Q6PI48 645 aaKnown RBP20.31■□□□□ 0.84
IRF3-221ENST00000598808 NCEH1Q6PIU2 408 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 TEX26Q8N6G2 289 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 ZNF419Q96HQ0 510 aaPredicted RBP20.31■□□□□ 0.84
IRF3-221ENST00000598808 NUDCD1Q96RS6 583 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 TUBGCP5Q96RT8 1024 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 MIR1-1HGQ9H1L0 117 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 C10orf88Q9H8K7 445 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 NOD2Q9HC29 1040 aa20.31■□□□□ 0.84
IRF3-221ENST00000598808 HACD1B0YJ81 288 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 SLC7A4O43246 635 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 PCDH8O95206 1070 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 ADRB3P13945 408 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 CSNK1DP48730 415 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 IFI35P80217 286 aaPredicted RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 ZNF33AQ06730 810 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 C2orf54Q08AI8 447 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 NUMA1Q14980 2115 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 SYCP2LQ5T4T6 812 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 PIP5KL1Q5T9C9 394 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 ABCA7Q8IZY2 2146 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 TTC13Q8NBP0 860 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 FOXJ1Q92949 421 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 FATE1Q969F0 183 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 MS4A14Q96JA4 679 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 ZC3H10Q96K80 434 aaKnown RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 HDAC8Q9BY41 377 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 CPEB1Q9BZB8 566 aaKnown RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 SUV39H2Q9H5I1 410 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 KLHL8Q9P2G9 620 aaPredicted RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 GOLGA6L10A0A0M3HER8 536 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 TCRBV7S2A1N4TA0A589 114 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 F5H423 210 aaPredicted RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 RBP3P10745 1247 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 C8orf74Q6P047 294 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 TTC7BQ86TV6 843 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 SLC13A5Q86YT5 568 aaPredicted RBP20.3■□□□□ 0.84
IRF3-221ENST00000598808 SUMF1Q8NBK3 374 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 OR2T34Q8NGX1 318 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 HTR3CQ8WXA8 447 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 PIGKQ92643 395 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 PCDHGC4Q9Y5F7 938 aa20.3■□□□□ 0.84
IRF3-221ENST00000598808 SDK1Q7Z5N4 2213 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 ANKRD36A6QL64 1941 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 KCNN4O15554 427 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 MTSS1O43312 755 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 PLRG1O43660 514 aaKnown RBP20.29■□□□□ 0.84
IRF3-221ENST00000598808 STK10O94804 968 aaKnown RBP20.29■□□□□ 0.84
IRF3-221ENST00000598808 RBL1P28749 1068 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 TNFRSF8P28908 595 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 XRCC4Q13426 336 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 CCDC6Q16204 474 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 KIAA0895LQ68EN5 471 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 SLC41A1Q8IVJ1 513 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 ZNF641Q96N77 438 aaPredicted RBP20.29■□□□□ 0.84
IRF3-221ENST00000598808 ARRDC1-AS1Q9H2J1 176 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 AMACRQ9UHK6 382 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 ITM2BQ9Y287 266 aa20.29■□□□□ 0.84
IRF3-221ENST00000598808 R3HDM2Q9Y2K5 976 aaKnown RBP20.29■□□□□ 0.84
IRF3-221ENST00000598808 CEP192Q8TEP8 1941 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 RIF1Q5UIP0 2472 aaKnown RBP20.28■□□□□ 0.84
IRF3-221ENST00000598808 FGGP02679 453 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 PRKCGP05129 697 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 C7P10643 843 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 ITPKAP23677 461 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 PTPN3P26045 913 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 MAT2AP31153 395 aaKnown RBP20.28■□□□□ 0.84
IRF3-221ENST00000598808 CD86P42081 329 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 ABL2P42684 1182 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 LONRF2Q1L5Z9 754 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 WDR45BQ5MNZ6 344 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 EIF1ADQ8N9N8 165 aaKnown RBP20.28■□□□□ 0.84
IRF3-221ENST00000598808 CADM4Q8NFZ8 388 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 MAIP1Q8WWC4 291 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 ATG4AQ8WYN0 398 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 IL12RB2Q99665 862 aa20.28■□□□□ 0.84
IRF3-221ENST00000598808 RNGTTO60942 597 aaKnown RBP20.27■□□□□ 0.84
IRF3-221ENST00000598808 EPN2O95208 641 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 CPP00450 1065 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 SERPINF2P08697 491 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 CR2P20023 1033 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 CA4P22748 312 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 MAOBP27338 520 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 PPP2CBP62714 309 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 PPP2CAP67775 309 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 TRAF2Q12933 501 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 KLF1Q13351 362 aaPredicted RBP20.27■□□□□ 0.84
IRF3-221ENST00000598808 RALGPS1Q5JS13 557 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 ERAP2Q6P179 960 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 BRAT1Q6PJG6 821 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.27■□□□□ 0.847e-8■■■■■ 60.2
IRF3-221ENST00000598808 RUNDC3BQ96NL0 473 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 PREBQ9HCU5 417 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 ATP8A1Q9Y2Q0 1164 aa20.27■□□□□ 0.84
IRF3-221ENST00000598808 RAI2Q9Y5P3 530 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms