RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SOCS5O75159 536 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 ZNF806P0C7X5 589 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 TIMP2P16035 220 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 CES1P23141 567 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 CD27P26842 260 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 MAT2AP31153 395 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 EIF3EP60228 445 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 DSC2Q02487 901 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 CSRP2Q16527 193 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 DUOXA1Q1HG43 343 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 RSPO4Q2I0M5 234 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 PLA2G2CQ5R387 149 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 PEAR1Q5VY43 1037 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 NEK5Q6P3R8 708 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 TRIM69Q86WT6 500 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 ZCCHC9Q8N567 271 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 GPR161Q8N6U8 529 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 TTC13Q8NBP0 860 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 PDCD6IPQ8WUM4 868 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 FERMT1Q9BQL6 677 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 PARD6AQ9NPB6 346 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 ATP8A1Q9Y2Q0 1164 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 PCDHGC4Q9Y5F7 938 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 CACNA1EQ15878 2313 aa19.84■□□□□ 0.77
SHKBP1-214ENST00000597396 A0A1W2PQU0 124 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 TSPAN6O43657 245 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 CFIP05156 583 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 SUOXP51687 545 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 ELP6Q0PNE2 266 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 UGP2Q16851 508 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 SLC45A4Q5BKX6 768 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 ZNF569Q5MCW4 686 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 ALG1LQ6GMV1 187 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 HORMAD1Q86X24 394 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 CDKL3Q8IVW4 592 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 C12orf50Q8NA57 414 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 CEP76Q8TAP6 659 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 FEM1CQ96JP0 617 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 NSMCE3Q96MG7 304 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 AGAP3Q96P47 875 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 CARD9Q9H257 536 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 PYCARDQ9ULZ3 195 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 ITM2BQ9Y287 266 aa19.83■□□□□ 0.77
SHKBP1-214ENST00000597396 A0A1B0GTW7 788 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 A0A1W2PPC4 97 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 A0A1W2PQ67 120 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 PATE3B3GLJ2 98 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 TRAFD1O14545 582 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 KHNYNO15037 678 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 BCAT2O15382 392 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 KIF5CO60282 957 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 CPP00450 1065 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 SERPINF2P08697 491 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 RBP3P10745 1247 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 CA4P22748 312 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 MSNP26038 577 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 PTPN3P26045 913 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 NUDT1P36639 197 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 POLR2LP62875 67 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 TRAF2Q12933 501 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 SF3A2Q15428 464 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 SETMARQ53H47 684 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 TEX44Q53QW1 395 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 TRIM61Q5EBN2 209 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 KIAA1161Q6NSJ0 714 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 ERAP2Q6P179 960 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 ZSWIM9Q86XI8 627 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 CNTD1Q8N815 330 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 HTR3CQ8WXA8 447 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 KLK6Q92876 244 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 ECHDC3Q96DC8 303 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 FAM118BQ9BPY3 351 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 TLR10Q9BXR5 811 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 NUSAP1Q9BXS6 441 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 DLL3Q9NYJ7 618 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 KLHL8Q9P2G9 620 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 GGT7Q9UJ14 662 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 RAI2Q9Y5P3 530 aa19.82■□□□□ 0.76
SHKBP1-214ENST00000597396 PRR5-ARHGAP8B1AHC4 643 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 AREL1O15033 823 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 HTRA2O43464 458 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 LATO43561 262 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 RPS21P63220 83 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 NIPAL4Q0D2K0 466 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 KLF1Q13351 362 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 FAM182AQ5T1J6 154 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 ARMC12Q5T9G4 340 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 TCEAL6Q6IPX3 200 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 DARS2Q6PI48 645 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 PRR23CQ6ZRP0 262 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 ZSCAN30Q86W11 494 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC35F6Q8N357 371 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 ARRDC2Q8TBH0 407 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 CXorf40AQ8TE69 158 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 TCEAL3Q969E4 200 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 PCDH12Q9NPG4 1184 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 ZFR2Q9UPR6 939 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 JRKLQ9Y4A0 524 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 PCDHB9Q9Y5E1 797 aa19.81■□□□□ 0.76
SHKBP1-214ENST00000597396 TMEM131Q92545 1883 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms