RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 BCL2L1Q07817 233 aa21.28■■□□□ 1
PNKP-209ENST00000596726 HNRNPDQ14103 355 aaKnown RBP21.28■■□□□ 1
PNKP-209ENST00000596726 IFI16Q16666 785 aaKnown RBP21.28■■□□□ 1
PNKP-209ENST00000596726 N4BP2L1Q5TBK1 243 aaPredicted RBP21.28■■□□□ 1
PNKP-209ENST00000596726 C11orf63Q6NUN7 778 aa21.28■■□□□ 1
PNKP-209ENST00000596726 GCNT7Q6ZNI0 430 aa21.28■■□□□ 1
PNKP-209ENST00000596726 ABI3BPQ7Z7G0 1075 aa21.28■■□□□ 1
PNKP-209ENST00000596726 BBS5Q8N3I7 341 aa21.28■■□□□ 1
PNKP-209ENST00000596726 PLD5Q8N7P1 536 aa21.28■■□□□ 1
PNKP-209ENST00000596726 BMFQ96LC9 184 aa21.28■■□□□ 1
PNKP-209ENST00000596726 KLF6Q99612 283 aaPredicted RBP21.28■■□□□ 1
PNKP-209ENST00000596726 MYOCQ99972 504 aa21.28■■□□□ 1
PNKP-209ENST00000596726 GOLPH3Q9H4A6 298 aa21.28■■□□□ 1
PNKP-209ENST00000596726 GDF3Q9NR23 364 aa21.28■■□□□ 1
PNKP-209ENST00000596726 DTLQ9NZJ0 730 aa21.28■■□□□ 1
PNKP-209ENST00000596726 NCOR2Q9Y618 2525 aa21.27■■□□□ 1
PNKP-209ENST00000596726 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.27■■□□□ 1
PNKP-209ENST00000596726 TTC24A2A3L6 582 aaPredicted RBP21.27■■□□□ 1
PNKP-209ENST00000596726 BTNL10A8MVZ5 291 aa21.27■■□□□ 1
PNKP-209ENST00000596726 RAD51BO15315 384 aa21.27■■□□□ 1
PNKP-209ENST00000596726 PSTPIP1O43586 416 aa21.27■■□□□ 1
PNKP-209ENST00000596726 PCDHGA12O60330 932 aa21.27■■□□□ 1
PNKP-209ENST00000596726 IPO7O95373 1038 aaKnown RBP21.27■■□□□ 1
PNKP-209ENST00000596726 MAP3K6O95382 1288 aa21.27■■□□□ 1
PNKP-209ENST00000596726 KRT1P04264 644 aa21.27■■□□□ 1
PNKP-209ENST00000596726 ADRB1P08588 477 aa21.27■■□□□ 1
PNKP-209ENST00000596726 MX2P20592 715 aa21.27■■□□□ 1
PNKP-209ENST00000596726 CCT8P50990 548 aa21.27■■□□□ 1
PNKP-209ENST00000596726 ELP6Q0PNE2 266 aa21.27■■□□□ 1
PNKP-209ENST00000596726 SHBQ15464 509 aa21.27■■□□□ 1
PNKP-209ENST00000596726 TAZQ16635 292 aa21.27■■□□□ 1
PNKP-209ENST00000596726 RALGPS1Q5JS13 557 aa21.27■■□□□ 1
PNKP-209ENST00000596726 PRAMEF14Q5SWL7 426 aa21.27■■□□□ 1
PNKP-209ENST00000596726 TIGD7Q6NT04 549 aaPredicted RBP21.27■■□□□ 1
PNKP-209ENST00000596726 NAXDQ8IW45 347 aa21.27■■□□□ 1
PNKP-209ENST00000596726 SPC24Q8NBT2 197 aa21.27■■□□□ 1
PNKP-209ENST00000596726 TPCN2Q8NHX9 752 aa21.27■■□□□ 1
PNKP-209ENST00000596726 FAM174AQ8TBP5 190 aa21.27■■□□□ 1
PNKP-209ENST00000596726 SPOCK2Q92563 424 aa21.27■■□□□ 1
PNKP-209ENST00000596726 HDAC11Q96DB2 347 aa21.27■■□□□ 1
PNKP-209ENST00000596726 KLHDC7BQ96G42 594 aa21.27■■□□□ 1
PNKP-209ENST00000596726 CAMK1GQ96NX5 476 aa21.27■■□□□ 1
PNKP-209ENST00000596726 PCDH12Q9NPG4 1184 aa21.27■■□□□ 1
PNKP-209ENST00000596726 RIOK3O14730 519 aaKnown RBP21.26■□□□□ 0.99
PNKP-209ENST00000596726 MATN3O15232 486 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 PJA2O43164 708 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 CBFA2T3O75081 653 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 TNNT1P13805 278 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 KCNA4P22459 653 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 XPAP23025 273 aaPredicted RBP21.26■□□□□ 0.99
PNKP-209ENST00000596726 RXRGP48443 463 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 CLDN2P57739 230 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 MAXP61244 160 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 SGCGQ13326 291 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 CFAP58Q5T655 872 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 MFSD7Q6UXD7 560 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 ACRBPQ8NEB7 543 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 DENND6BQ8NEG7 585 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 RNF25Q96BH1 459 aaPredicted RBP21.26■□□□□ 0.99
PNKP-209ENST00000596726 CALR3Q96L12 384 aaKnown RBP21.26■□□□□ 0.99
PNKP-209ENST00000596726 LACRTQ9GZZ8 138 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 NOD2Q9HC29 1040 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 GPR27Q9NS67 375 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 DUSP10Q9Y6W6 482 aa21.26■□□□□ 0.99
PNKP-209ENST00000596726 FLRT2O43155 660 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 HTRA2O43464 458 aaPredicted RBP21.25■□□□□ 0.99
PNKP-209ENST00000596726 MMP20O60882 483 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 THEGLP0DJG4 465 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 CDKN2BP42772 138 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 VAV2P52735 878 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 SUZ12Q15022 739 aaKnown RBP21.25■□□□□ 0.99
PNKP-209ENST00000596726 OXR1Q8N573 874 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 OR13H1Q8NG92 308 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 CXorf40AQ8TE69 158 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 CENPTQ96BT3 561 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 MAK16Q9BXY0 300 aaKnown RBP21.25■□□□□ 0.99
PNKP-209ENST00000596726 NT5MQ9NPB1 228 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 SCUBE2Q9NQ36 999 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 AMACRQ9UHK6 382 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 PCOLCE2Q9UKZ9 415 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 ATP8A1Q9Y2Q0 1164 aa21.25■□□□□ 0.99
PNKP-209ENST00000596726 TDRD6O60522 2096 aaKnown RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 POM121BA6NF01 834 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 APOL1O14791 398 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 SOCS5O75159 536 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 TM7SF2O76062 418 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 ZFXP17010 805 aaPredicted RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 MMP12P39900 470 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 POLR2LP62875 67 aaKnown RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 FAM193AP78312 1265 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 PPIDQ08752 370 aaKnown RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 ALG1LQ6GMV1 187 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 KYAT3Q6YP21 454 aaKnown RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 KATNAL2Q8IYT4 538 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 BAHD1Q8TBE0 780 aaPredicted RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 LRRN4Q8WUT4 740 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 WRAP53Q9BUR4 548 aaKnown RBP21.24■□□□□ 0.99
PNKP-209ENST00000596726 PCDHGC4Q9Y5F7 938 aa21.24■□□□□ 0.99
PNKP-209ENST00000596726 ARID1BQ8NFD5 2236 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms