RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 INAVAQ3KP66 663 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 CAMK1DQ8IU85 385 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 SLC22A18ASQ8N1D0 253 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 FATE1Q969F0 183 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 APOBEC2Q9Y235 224 aaKnown RBP13.18□□□□□ -0.3
USE1-207ENST00000596136 NEUROG3Q9Y4Z2 214 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
USE1-207ENST00000596136 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 A6NNZ2 444 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 ZNF487B1APH4 448 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 NEMP1O14524 444 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 RIOK3O14730 519 aaKnown RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 ITGAVP06756 1048 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 ATXN1LP0C7T5 689 aaKnown RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 SERPINA4P29622 427 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 RABIFP47224 123 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 PFN3P60673 137 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 AP1S1P61966 158 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 GALNT2Q10471 571 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 RALGPS1Q5JS13 557 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 Q6ZSR6 202 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 ZSWIM9Q86XI8 627 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 KCTD6Q8NC69 237 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 TSGA13Q96PP4 275 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 MYOCQ99972 504 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 SCNM1Q9BWG6 230 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 SHROOM3Q8TF72 1996 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
USE1-207ENST00000596136 ASPMQ8IZT6 3477 aa13.17□□□□□ -0.3
USE1-207ENST00000596136 PTPRBP23467 1997 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 SPTY2D1-AS1A0A0U1RR47 76 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.16□□□□□ -0.3
USE1-207ENST00000596136 TOR1BO14657 336 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 FPGTO14772 594 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 HTRA2O43464 458 aaPredicted RBP13.16□□□□□ -0.3
USE1-207ENST00000596136 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
USE1-207ENST00000596136 MMP20O60882 483 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 TM7SF2O76062 418 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 FECHP22830 423 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 KDELR1P24390 212 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 MMP12P39900 470 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 SCNN1BP51168 640 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
USE1-207ENST00000596136 BCL2L1Q07817 233 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 FZD2Q14332 565 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 MESDQ14696 234 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 SLC25A45Q8N413 288 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 PGBD5Q8N414 524 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 CHCHD4Q8N4Q1 142 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 ATPAF2Q8N5M1 289 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 TP53I13Q8NBR0 393 aaPredicted RBP13.16□□□□□ -0.3
USE1-207ENST00000596136 CXorf40AQ8TE69 158 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 MAML1Q92585 1016 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 NUDCD1Q96RS6 583 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 MGME1Q9BQP7 344 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 ATP8A1Q9Y2Q0 1164 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
USE1-207ENST00000596136 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 A0A1W2PQ67 120 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
USE1-207ENST00000596136 MFSD11O43934 449 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 SOCS5O75159 536 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 XPAP23025 273 aaPredicted RBP13.15□□□□□ -0.3
USE1-207ENST00000596136 DGKAP23743 735 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 CCNCP24863 283 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
USE1-207ENST00000596136 SLC1A1P43005 524 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 ZNF75DP51815 510 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 YPEL5P62699 121 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 POLR2LP62875 67 aaKnown RBP13.15□□□□□ -0.3
USE1-207ENST00000596136 ZNF235Q14590 738 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 MARC1Q5VT66 337 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 ALG1LQ6GMV1 187 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 GATA6Q92908 595 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
USE1-207ENST00000596136 C1QTNF7Q9BXJ2 289 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms