RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PRR19A6NJB7 356 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 K7EM74 188 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 DUX1O43812 170 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 GRAP2O75791 330 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 KRT38O76015 456 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 ALPIP09923 528 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 FGF3P11487 239 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 UGT1A3P35503 534 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 ACADSBP45954 432 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 MTIF2P46199 727 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 STILQ15468 1287 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 TRIM65Q6PJ69 517 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 ENPP7Q6UWV6 458 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 DCAF4L2Q8NA75 395 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 TRIM62Q9BVG3 475 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 TM6SF2Q9BZW4 377 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 MPP6Q9NZW5 540 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 LRIT1Q9P2V4 623 aa13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 HECAQ9UBI9 543 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-208ENST00000595726 I6L893 689 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 B4GAT1O43505 415 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 GLB1P16278 677 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 GNLYP22749 145 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 AMZ1Q400G9 498 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 C5orf22Q49AR2 442 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 EFHC2Q5JST6 749 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 TMEM110Q86TL2 294 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 GKN2Q86XP6 184 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 ZNF683Q8IZ20 524 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 RYBPQ8N488 228 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 TP53I13Q8NBR0 393 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 OR6C4Q8NGE1 309 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 VOPP1Q96AW1 172 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 EPAS1Q99814 870 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 CNTN6Q9UQ52 1028 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 B3GALT1Q9Y5Z6 326 aa13.91□□□□□ -0.18
SHKBP1-208ENST00000595726 GTPBP10A4D1E9 387 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 RASGRP1O95267 797 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 SLC9A1P19634 815 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 POU3F2P20265 443 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 BLKP51451 505 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 B4GALNT1Q00973 533 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 APBA1Q02410 837 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 IRF4Q15306 451 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 MAN2A1Q16706 1144 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 ARHGAP44Q17R89 818 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 EXOC3L4Q17RC7 722 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 DEFB109BQ30KR1 87 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 MAP9Q49MG5 647 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 LACTB2Q53H82 288 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 CT47A1Q5JQC4 288 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 PCDH20Q8N6Y1 951 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 FAM46DQ8NEK8 389 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 RAB7BQ96AH8 199 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 CATSPER2Q96P56 530 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 SLC2A13Q96QE2 648 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 TAAR9Q96RI9 348 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 APEX2Q9UBZ4 518 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 TP53TG5Q9Y2B4 290 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 COQ6Q9Y2Z9 468 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 OR1A2Q9Y585 309 aa13.9□□□□□ -0.18
SHKBP1-208ENST00000595726 ZNF891A8MT65 544 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 KRIT1O00522 736 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 AREL1O15033 823 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 SEMA7AO75326 666 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 TM7SF2O76062 418 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 CD160O95971 181 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 UGT2B4P06133 528 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 OR1E1P30953 314 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 OR1D5P58170 312 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ARF5P84085 180 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 KLRB1Q12918 225 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ZNF805Q5CZA5 627 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 MIIPQ5JXC2 388 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 FHL5Q5TD97 284 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 OGFOD3Q6PK18 319 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 SETD3Q86TU7 594 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 TTC7BQ86TV6 843 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 PIM3Q86V86 326 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 ZSCAN30Q86W11 494 aa13.89□□□□□ -0.19
SHKBP1-208ENST00000595726 UNC5BQ8IZJ1 945 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms