RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 FAM118BQ9BPY3 351 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 ATP13A3Q9H7F0 1226 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 SCUBE2Q9NQ36 999 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 AASDHPPTQ9NRN7 309 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 DKK3Q9UBP4 350 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 SUSD2Q9UGT4 822 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 AMFRQ9UKV5 643 aa15.52■□□□□ 0.07
USE1-206ENST00000595101 DOCK9Q9BZ29 2069 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 A0A0U1RQS6 177 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 CCDC66A2RUB6 948 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 A8MX80 341 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 RAD51BO15315 384 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 AP1G1O43747 822 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 MMP20O60882 483 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 ZFXP17010 805 aaPredicted RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 AFF3P51826 1226 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 RWDD2BP57060 319 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 CLDN2P57739 230 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 RACK1P63244 317 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 TRAF2Q12933 501 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 KIF19Q2TAC6 998 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 PDCD6IPQ8WUM4 868 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 ECHDC3Q96DC8 303 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 RBM41Q96IZ5 413 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 CALR3Q96L12 384 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 ZNF641Q96N77 438 aaPredicted RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 TUBGCP5Q96RT8 1024 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 WRAP53Q9BUR4 548 aaKnown RBP15.51■□□□□ 0.07
USE1-206ENST00000595101 PCDH12Q9NPG4 1184 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 SEPT10Q9P0V9 454 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 SNX11Q9Y5W9 270 aa15.51■□□□□ 0.07
USE1-206ENST00000595101 A0A1W2PR77 199 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 TSPAN11A1L157 253 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 NEMP1O14524 444 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 PDHA1P08559 390 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 SERPINA4P29622 427 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 DPP6P42658 865 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 AP1S1P61966 158 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 CCDC15Q0P6D6 951 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 PDK1Q15118 436 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 TIGD7Q6NT04 549 aaPredicted RBP15.5■□□□□ 0.07
USE1-206ENST00000595101 NEK5Q6P3R8 708 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 PRPF39Q86UA1 669 aaKnown RBP15.5■□□□□ 0.07
USE1-206ENST00000595101 MINDY1Q8N5J2 469 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 RNF10Q8N5U6 811 aaKnown RBP15.5■□□□□ 0.07
USE1-206ENST00000595101 ARRDC2Q8TBH0 407 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 FEM1CQ96JP0 617 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 ANKRD6Q9Y2G4 727 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 PPP2R2CQ9Y2T4 447 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 COQ6Q9Y2Z9 468 aa15.5■□□□□ 0.07
USE1-206ENST00000595101 GOLGA8CPA6NN73 597 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 UPK3BL1B0FP48 263 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PRR5-ARHGAP8B1AHC4 643 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 UPK3BL2E5RIL1 263 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 HTRA2O43464 458 aaPredicted RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 KRT86O43790 486 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 CCDC175P0C221 793 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 ARHGAP8P85298 464 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 TFDP2Q14188 446 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PPP2R5EQ16537 467 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 UAP1L1Q3KQV9 507 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 BRAT1Q6PJG6 821 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 BBS12Q6ZW61 710 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 TXLNBQ8N3L3 684 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 TMEM145Q8NBT3 493 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 NETO1Q8TDF5 533 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 P3H4Q92791 437 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 FATE1Q969F0 183 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 RAB7BQ96AH8 199 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 HES6Q96HZ4 224 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 IL12RB2Q99665 862 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 SLC17A9Q9BYT1 436 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 OSBPL8Q9BZF1 889 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 TSGA10Q9BZW7 698 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 ATP8A1Q9Y2Q0 1164 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PCDHB9Q9Y5E1 797 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 SHROOM3Q8TF72 1996 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PCDH15Q96QU1 1955 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 ADAMTS9Q9P2N4 1935 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 DCDC2BA2VCK2 349 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 RIOK3O14730 519 aaKnown RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 TSPAN6O43657 245 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 MMP2P08253 660 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 TGM2P21980 687 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 CD38P28907 300 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 HSPA9P38646 679 aaKnown RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 GRIA4P48058 902 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 RPS21P63220 83 aaKnown RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 GRM3Q14832 879 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PRKD1Q15139 912 aaPredicted RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 HLA-BQ31612 363 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 NAPEPLDQ6IQ20 393 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 RABEPKQ7Z6M1 372 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 ADAT2Q7Z6V5 191 aaKnown RBP15.49■□□□□ 0.07
USE1-206ENST00000595101 SYCE1Q8N0S2 351 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 BBS5Q8N3I7 341 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 AGAP3Q96P47 875 aa15.49■□□□□ 0.07
USE1-206ENST00000595101 POLR1EQ9GZS1 481 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms