RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 ADAM17P78536 824 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SELENBP1Q13228 472 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 MTMR2Q13614 643 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 LRP8Q14114 963 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PSMD6Q15008 389 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ACAP2Q15057 778 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SLC1A5Q15758 541 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 DGUOKQ16854 277 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 RNASEH2BQ5TBB1 312 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 KRT79Q5XKE5 535 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 FAM109BQ6ICB4 259 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 LETMD1Q6P1Q0 360 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 POTEGQ6S5H5 508 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ENOSF1Q7L5Y1 443 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 NEK8Q86SG6 692 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PLCZ1Q86YW0 608 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SLC9A9Q8IVB4 645 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PALM2Q8IXS6 379 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 EXD1Q8NHP7 514 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 RFWD2Q8NHY2 731 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PSPC1Q8WXF1 523 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TIFAQ96CG3 184 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 VCPIP1Q96JH7 1222 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 BBS4Q96RK4 519 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 APOL4Q9BPW4 351 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TRIM56Q9BRZ2 755 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 C9orf16Q9BUW7 83 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 NPLQ9BXD5 320 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 NMUR2Q9GZQ4 415 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 C6orf62Q9GZU0 229 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 DPEP3Q9H4B8 488 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 EFCAB1Q9HAE3 211 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CRLF2Q9HC73 371 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PTTG3PQ9NZH4 202 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TBC1D14Q9P2M4 693 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PPIL1Q9Y3C6 166 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ASB4Q9Y574 426 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PCDHA8Q9Y5H6 950 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ST14Q9Y5Y6 855 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 OTOFQ9HC10 1997 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ASTN1O14525 1302 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ARHGAP42A6NI28 874 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 EIF4E1BA6NMX2 242 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 GPRIN2O60269 458 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ITGAVP06756 1048 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 C6orf222P0C671 652 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ZNF26P17031 533 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PRKCAP17252 672 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PTPRAP18433 802 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 IL10P22301 178 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 GSTM2P28161 218 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SLC7A1P30825 629 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 MCM7P33993 719 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CRHR1P34998 444 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 GMPRP36959 345 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TALDO1P37837 337 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 GP5P40197 560 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 AP1S2P56377 157 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 NCOA4Q13772 614 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 VGLL4Q14135 290 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TEX44Q53QW1 395 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 IZUMO3Q5VZ72 239 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ZNF773Q6PK81 442 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 MAMDC4Q6UXC1 1216 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CYP4V2Q6ZWL3 525 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 FAM83AQ86UY5 434 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 IGFN1Q86VF2 1251 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 HPS6Q86YV9 775 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ARHGEF19Q8IW93 802 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CCDC60Q8IWA6 550 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 KIAA2013Q8IYS2 634 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 FIBCD1Q8N539 461 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TDRD5Q8NAT2 981 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ETNPPLQ8TBG4 499 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 OSCP1Q8WVF1 389 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 WFDC12Q8WWY7 111 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 KRT35Q92764 455 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 NKD2Q969F2 451 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TTC17Q96AE7 1141 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ACDQ96AP0 544 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ZUFSPQ96AP4 578 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 VPS33AQ96AX1 596 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 HDAC11Q96DB2 347 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 ASB9Q96DX5 294 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 METTL2AQ96IZ6 378 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 DEPDC7Q96QD5 511 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 GCNAQ96QF7 691 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CIB1Q99828 191 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 AGPAT1Q99943 283 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TSEN34Q9BSV6 310 aaKnown RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TRIM31Q9BZY9 425 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 SIX2Q9NPC8 291 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 TOPORSQ9NS56 1045 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-202ENST00000594814 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
LRIT3-202ENST00000594814 CXXC1Q9P0U4 656 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms