RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SMYD2Q9NRG4 433 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 ERVW-1Q9UQF0 538 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 TCAF1Q9Y4C2 921 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MYLKQ15746 1914 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 COL4A3Q01955 1670 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 ZCWPW2A0A1B0GU75 182 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 FAM159BA6NKW6 160 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CXorf49A8MYA2 514 aaPredicted RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 IGSF6O95976 241 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 SP100P23497 879 aaPredicted RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 ADRA1DP25100 572 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 NMBRP28336 390 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 GDI1P31150 447 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 ADGRD1Q6QNK2 874 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MTSS1LQ765P7 747 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 OR2AP1Q8NGE2 309 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CYB5D2Q8WUJ1 264 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 PTCD2Q8WV60 388 aaKnown RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 SORCS1Q8WY21 1168 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MRGPRX3Q96LB0 322 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 SELENOSQ9BQE4 189 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CEP44Q9C0F1 390 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 MRM3Q9HC36 420 aaKnown RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 GTSE1Q9NYZ3 720 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 DEC1Q9P2X7 70 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 EVLQ9UI08 416 aaPredicted RBP15.31■□□□□ 0.04
VRK3-207ENST00000594092 FAM169AQ9Y6X4 670 aa15.31■□□□□ 0.04
VRK3-207ENST00000594092 CCDC78A2IDD5 438 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 GRXCR2A6NFK2 248 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 PDHA1P08559 390 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 KRT15P19012 456 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 MAPK8P45983 427 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
VRK3-207ENST00000594092 SEPT6Q14141 434 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 FRG1Q14331 258 aaKnown RBP15.3■□□□□ 0.04
VRK3-207ENST00000594092 DLG2Q15700 870 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 ACCSLQ4AC99 568 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 ARMC3Q5W041 872 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 GRAMD4Q6IC98 578 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 PCDH20Q8N6Y1 951 aaKnown RBP15.3■□□□□ 0.04
VRK3-207ENST00000594092 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
VRK3-207ENST00000594092 SLC44A1Q8WWI5 657 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 RANBP9Q96S59 729 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 TRMT61BQ9BVS5 477 aaKnown RBP15.3■□□□□ 0.04
VRK3-207ENST00000594092 CIPCQ9C0C6 399 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 PRKAG3Q9UGI9 489 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 ACTL7BQ9Y614 415 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 NUMBLQ9Y6R0 609 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 ANKRD36A6QL64 1941 aa15.3■□□□□ 0.04
VRK3-207ENST00000594092 HEATR9A2RTY3 570 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 SHOX2O60902 331 aaPredicted RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 GSRP00390 522 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 INHBAP08476 426 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ALADP13716 330 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 GJA4P35212 333 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 HTR4Q13639 388 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 NAIF1Q69YI7 327 aaPredicted RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 LRRC6Q86X45 466 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 CAMK1DQ8IU85 385 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 CTAGE3PQ8IX95 158 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 DCAKDQ8WVC6 231 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 NXPE3Q969Y0 559 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 IL1RAPL1Q9NZN1 696 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 SENP1Q9P0U3 644 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 PRRT4C9JH25 899 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ANHXE9PGG2 379 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ARNTLO00327 626 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 FZD6O60353 706 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PIGNO95427 931 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ASLP04424 464 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PRKCGP05129 697 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ATP5BP06576 529 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 DLDP09622 509 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 CA4P22748 312 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 GKP32189 559 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 MDH1P40925 334 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 OPRD1P41143 372 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 VASPP50552 380 aaPredicted RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 GNGT1P63211 74 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 KDSRQ06136 332 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PTPRNQ16849 979 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 ZNF449Q6P9G9 518 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 SRRM1Q8IYB3 904 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 PHTF2Q8N3S3 785 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 RYBPQ8N488 228 aaPredicted RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 LPCAT1Q8NF37 534 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PDCD6IPQ8WUM4 868 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 VOPP1Q96AW1 172 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 CERS2Q96G23 380 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 MYO19Q96H55 970 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 PPANQ9NQ55 473 aaKnown RBP15.29■□□□□ 0.04
VRK3-207ENST00000594092 ELOVL2Q9NXB9 296 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 SLC2A6Q9UGQ3 507 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms