RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 POLR3GO15318 223 aaPredicted RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 PDHA1P08559 390 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 ALADP13716 330 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 CA4P22748 312 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 ATP5DP30049 168 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 VASPP50552 380 aaPredicted RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 MAGOHP61326 146 aaKnown RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 SNRPD1P62314 119 aaKnown RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 SKIDA1Q1XH10 827 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 MTSS1LQ765P7 747 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 CTAGE3PQ8IX95 158 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 PCDH20Q8N6Y1 951 aaKnown RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 PPM1NQ8N819 430 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 MRGPRX3Q96LB0 322 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 TREX1Q9NSU2 369 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 EVLQ9UI08 416 aaPredicted RBP20.96■□□□□ 0.95
PNKP-203ENST00000593946 SLCO3A1Q9UIG8 710 aa20.96■□□□□ 0.95
PNKP-203ENST00000593946 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.95■□□□□ 0.94
PNKP-203ENST00000593946 FZD6O60353 706 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 GSRP00390 522 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 SLC6A11P48066 632 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MGAT5Q09328 741 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MESP2Q0VG99 397 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 NR1H3Q13133 447 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 SEPT6Q14141 434 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 TMED2Q15363 201 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 SLC26A11Q86WA9 606 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 LRCH3Q96II8 777 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 DEC1Q9P2X7 70 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MROH6A6NGR9 719 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 ASLP04424 464 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 INHBAP08476 426 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 NAB1Q13506 487 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 DLG2Q15700 870 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 GRAMD4Q6IC98 578 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MARK2Q7KZI7 788 aaKnown RBP20.95■□□□□ 0.94
PNKP-203ENST00000593946 OR6K2Q8NGY2 324 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 SORCS1Q8WY21 1168 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MYLIPQ8WY64 445 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 CDKL2Q92772 493 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 VOPP1Q96AW1 172 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 MYO19Q96H55 970 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 RPP25Q9BUL9 199 aaKnown RBP20.95■□□□□ 0.94
PNKP-203ENST00000593946 ADGRE3Q9BY15 652 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 PPANQ9NQ55 473 aaKnown RBP20.95■□□□□ 0.94
PNKP-203ENST00000593946 GTSE1Q9NYZ3 720 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 IL1RAPL1Q9NZN1 696 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 ZNF180Q9UJW8 692 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 IKBKGQ9Y6K9 419 aa20.95■□□□□ 0.94
PNKP-203ENST00000593946 CCDC78A2IDD5 438 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 H3BQ06 376 aaPredicted RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 ARNTLO00327 626 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 TRAFD1O14545 582 aaPredicted RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 PAPSS2O95340 614 aaPredicted RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 ATP5BP06576 529 aaKnown RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 DLDP09622 509 aaKnown RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 ERVK-10P10266 1014 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 NR1D1P20393 614 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 GDI1P31150 447 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 PHTF2Q8N3S3 785 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 FAM76AQ8TAV0 307 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 CYB5D2Q8WUJ1 264 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 RMDN1Q96DB5 314 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 TRMT61BQ9BVS5 477 aaKnown RBP20.94■□□□□ 0.94
PNKP-203ENST00000593946 CIPCQ9C0C6 399 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 PRUNE2Q8WUY3 3088 aa20.94■□□□□ 0.94
PNKP-203ENST00000593946 ANKRD66B4E2M5 251 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 HTRA2O43464 458 aaPredicted RBP20.93■□□□□ 0.94
PNKP-203ENST00000593946 LDB2O43679 373 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 UGT1A9O60656 530 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 SOCS5O75159 536 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 PRKCGP05129 697 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 SRPRAP08240 638 aaKnown RBP20.93■□□□□ 0.94
PNKP-203ENST00000593946 GJA4P35212 333 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 BCL2L1Q07817 233 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 HTR4Q13639 388 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 PTPRNQ16849 979 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 ACCSLQ4AC99 568 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 TSTD2Q5T7W7 516 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 ESRP1Q6NXG1 681 aaKnown RBP20.93■□□□□ 0.94
PNKP-203ENST00000593946 EXOC3L1Q86VI1 746 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 KCNMB4Q86W47 210 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 RASSF3Q86WH2 238 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 CAMK1DQ8IU85 385 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 PLPP6Q8IY26 295 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 LPCAT1Q8NF37 534 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 BRSK1Q8TDC3 778 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 PDCD6IPQ8WUM4 868 aaKnown RBP20.93■□□□□ 0.94
PNKP-203ENST00000593946 ATP13A3Q9H7F0 1226 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 UGT1A7Q9HAW7 530 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 UGT1A10Q9HAW8 530 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 UGT1A8Q9HAW9 530 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 ZFATQ9P243 1243 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 SLC2A6Q9UGQ3 507 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 NUMBLQ9Y6R0 609 aa20.93■□□□□ 0.94
PNKP-203ENST00000593946 TCF20Q9UGU0 1960 aaKnown RBP20.93■□□□□ 0.94
PNKP-203ENST00000593946 PRRT4C9JH25 899 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 ANHXE9PGG2 379 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 PGLSO95336 258 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 ARNTP27540 789 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms