RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 RNF103O00237 685 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 PLK4O00444 970 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 SLC7A4O43246 635 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 CETN2P41208 172 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 CSNK1DP48730 415 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 NR2C2P49116 596 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 ZNF33AQ06730 810 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 NSUN2Q08J23 767 aaKnown RBP eCLIP19.84■□□□□ 0.77
LSM4-203ENST00000593829 CUL1Q13616 776 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 MARC1Q5VT66 337 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 LYSMD4Q5XG99 296 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 CCNYQ8ND76 341 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 OR14C36Q8NHC7 312 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 ZNF473Q8WTR7 871 aaKnown RBP19.84■□□□□ 0.77
LSM4-203ENST00000593829 FAM131CQ96AQ9 280 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 ARRDC3Q96B67 414 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 HDAC11Q96DB2 347 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 HSPA12BQ96MM6 686 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 CPEB1Q9BZB8 566 aaKnown RBP19.84■□□□□ 0.77
LSM4-203ENST00000593829 TMBIM4Q9HC24 238 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 PACSIN2Q9UNF0 486 aaPredicted RBP19.84■□□□□ 0.77
LSM4-203ENST00000593829 PCDHGA5Q9Y5G8 931 aa19.84■□□□□ 0.77
LSM4-203ENST00000593829 SPAG17Q6Q759 2223 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 MATN3O15232 486 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 ITGB7P26010 798 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 MMP13P45452 471 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 MRPS25P82663 173 aaKnown RBP19.83■□□□□ 0.77
LSM4-203ENST00000593829 CREB5Q02930 508 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 HNRNPDQ14103 355 aaKnown RBP19.83■□□□□ 0.77
LSM4-203ENST00000593829 GRM3Q14832 879 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 PDK1Q15118 436 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 NPNTQ6UXI9 565 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 BZW1Q7L1Q6 419 aaKnown RBP19.83■□□□□ 0.77
LSM4-203ENST00000593829 SLC41A1Q8IVJ1 513 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 FATE1Q969F0 183 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 PBKQ96KB5 322 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 HDAC8Q9BY41 377 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 EFR3BQ9Y2G0 817 aa19.83■□□□□ 0.77
LSM4-203ENST00000593829 USP34Q70CQ2 3546 aa19.83■□□□□ 0.76
LSM4-203ENST00000593829 ZFHX2Q9C0A1 2572 aaPredicted RBP19.83■□□□□ 0.76
LSM4-203ENST00000593829 THADAQ6YHU6 1953 aa19.83■□□□□ 0.76
LSM4-203ENST00000593829 LRRC72A6NJI9 287 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 FAM107AO95990 144 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 UGT2B4P06133 528 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 TGM2P21980 687 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 SKIDA1Q1XH10 827 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ZNF805Q5CZA5 627 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 AGBL4Q5VU57 503 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 GDPD4Q6W3E5 623 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ERN2Q76MJ5 926 aaKnown RBP19.82■□□□□ 0.76
LSM4-203ENST00000593829 CYP2U1Q7Z449 544 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 VOPP1Q96AW1 172 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 HES6Q96HZ4 224 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 CABS1Q96KC9 395 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 KRT12Q99456 494 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 HEMGNQ9BXL5 484 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ARRDC1-AS1Q9H2J1 176 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 C6orf106Q9H6K1 298 aaPredicted RBP19.82■□□□□ 0.76
LSM4-203ENST00000593829 BCLAF3A2AJT9 711 aaKnown RBP19.82■□□□□ 0.76
LSM4-203ENST00000593829 FAM47DPA6NHR8 397 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 METTL12A8MUP2 240 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 MUSKO15146 869 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 INSIG1O15503 277 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 PTPN7P35236 360 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 RGRP47804 291 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ADPRHP54922 357 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ADCY2Q08462 1091 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 PPIDQ08752 370 aaKnown RBP19.82■□□□□ 0.76
LSM4-203ENST00000593829 SYCP2LQ5T4T6 812 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 PIP5KL1Q5T9C9 394 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 CCDC13Q8IYE1 715 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 TEX26Q8N6G2 289 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 OR2T34Q8NGX1 318 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 ACTRT1Q8TDG2 376 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 MAML1Q92585 1016 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 OLFM3Q96PB7 478 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 MYCBPQ99417 103 aaPredicted RBP19.82■□□□□ 0.76
LSM4-203ENST00000593829 LGMNQ99538 433 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 BRD8Q9H0E9 1235 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 KDM4CQ9H3R0 1056 aa19.82■□□□□ 0.76
LSM4-203ENST00000593829 MEI4A8MW99 385 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 PPP1R12AO14974 1030 aaPredicted RBP19.81■□□□□ 0.76
LSM4-203ENST00000593829 DDX3YO15523 660 aaKnown RBP19.81■□□□□ 0.76
LSM4-203ENST00000593829 PLRG1O43660 514 aaKnown RBP19.81■□□□□ 0.76
LSM4-203ENST00000593829 PYGMP11217 842 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 MAPK8P45983 427 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 SCNN1BP51168 640 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 KCTD16Q68DU8 428 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 TTC19Q6DKK2 380 aaPredicted RBP19.81■□□□□ 0.76
LSM4-203ENST00000593829 NCEH1Q6PIU2 408 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 C6orf89Q6UWU4 347 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 BBS12Q6ZW61 710 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 LRRN4Q8WUT4 740 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 IFT81Q8WYA0 676 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 P3H4Q92791 437 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 LRRC45Q96CN5 670 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 KLHL32Q96NJ5 620 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 TUBGCP5Q96RT8 1024 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 OSBPL8Q9BZF1 889 aa19.81■□□□□ 0.76
LSM4-203ENST00000593829 SAE1Q9UBE0 346 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms