RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 WDR36Q8NI36 951 aaKnown RBP14.92□□□□□ -0.02
PNKP-202ENST00000593706 RXFP2Q8WXD0 754 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 WBP1Q96G27 269 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 SLC46A1Q96NT5 459 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 EPAS1Q99814 870 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 CCDC3Q9BQI4 270 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 WRAP53Q9BUR4 548 aaKnown RBP14.92□□□□□ -0.02
PNKP-202ENST00000593706 RAB6CQ9H0N0 254 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 RETREG1Q9H6L5 497 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.92□□□□□ -0.02
PNKP-202ENST00000593706 PCDHGA8Q9Y5G5 932 aa14.92□□□□□ -0.02
PNKP-202ENST00000593706 SPTA1P02549 2419 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 CCDC187A0A096LP49 1063 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 A0A1W2PNU3 283 aaPredicted RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 TCRBV5S1A1TA0A578 114 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 ZSCAN5CA6NGD5 496 aaPredicted RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 FAM72CH0Y354 149 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 J3QKU1 62 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 BUB1O43683 1085 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 MMP20O60882 483 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 TMCC1O94876 653 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 LRIG2O94898 1065 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 XPAP23025 273 aaPredicted RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 EIF4A3P38919 411 aaKnown RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 RHOAP61586 193 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 PPARDQ03181 441 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 TCEA2Q15560 299 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 CCDC14Q49A88 953 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 FAM72AQ5TYM5 149 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 FAM72DQ6L9T8 149 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 STRADAQ7RTN6 431 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 FAM72BQ86X60 149 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 PHF13Q86YI8 300 aaPredicted RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 CCDC185Q8N715 623 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 SLC30A5Q8TAD4 765 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 FAM172AQ8WUF8 416 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 SCG3Q8WXD2 468 aaKnown RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 CENPTQ96BT3 561 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 TBATAQ96M53 351 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 NCAPGQ9BPX3 1015 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 TTYH3Q9C0H2 523 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 SIRPGQ9P1W8 387 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 GULP1Q9UBP9 304 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 MYO6Q9UM54 1294 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 NEU3Q9UQ49 428 aa14.91□□□□□ -0.02
PNKP-202ENST00000593706 TLN1Q9Y490 2541 aaKnown RBP14.91□□□□□ -0.02
PNKP-202ENST00000593706 A0A1W2PQC6 194 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 SYCE3A1L190 88 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 PMS2P1A4D2B8 440 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 SMTNL1A8MU46 457 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 AREL1O15033 823 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 KDELR3O43731 214 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 TNFSF15O95150 251 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 PLEKP08567 350 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 TSHRP16473 764 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 PTPN9P43378 593 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 BLKP51451 505 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 IRF4Q15306 451 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 ELOCQ15369 112 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 ZSCAN23Q3MJ62 389 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 CCDC81Q6ZN84 652 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 IRF2BP2Q7Z5L9 587 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 HID1Q8IV36 788 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 FSTL5Q8N475 847 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 PCDH19Q8TAB3 1148 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 JOSD2Q8TAC2 188 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 PCMTD1Q96MG8 357 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 NAP1L5Q96NT1 182 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 CLPBQ9H078 707 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 MBNL1Q9NR56 388 aaKnown RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 PNMA8BQ9ULN7 279 aaPredicted RBP14.9□□□□□ -0.02
PNKP-202ENST00000593706 PADI4Q9UM07 663 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 BSNQ9UPA5 3926 aa14.9□□□□□ -0.02
PNKP-202ENST00000593706 NAV2Q8IVL1 2488 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 HECTD1Q9ULT8 2610 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 C2CD4BA6NLJ0 364 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 CDRT15L2A8MXV6 281 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 TOR1BO14657 336 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 CASC3O15234 703 aaKnown RBP14.89□□□□□ -0.03
PNKP-202ENST00000593706 YY2O15391 372 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 GJB6O95452 261 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 ALPIP09923 528 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 CTSEP14091 401 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 MLLT3P42568 568 aaPredicted RBP14.89□□□□□ -0.03
PNKP-202ENST00000593706 PDX1P52945 283 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 HDAC4P56524 1084 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 ELP6Q0PNE2 266 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 LRRC14Q15048 493 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 EFHC2Q5JST6 749 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 CFAP58Q5T655 872 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 KIAA1614Q5VZ46 1190 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 ARL10Q8N8L6 244 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 KYQ8NBH2 561 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 TP53I13Q8NBR0 393 aaPredicted RBP14.89□□□□□ -0.03
PNKP-202ENST00000593706 CASKIN2Q8WXE0 1202 aa14.89□□□□□ -0.03
PNKP-202ENST00000593706 TTC9Q92623 222 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms