RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GSCP56915 257 aaPredicted RBP16.53■□□□□ 0.24
LIG1-205ENST00000593425 RAD51Q06609 339 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 SPIDRQ14159 915 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 TMEM52BQ4KMG9 183 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 KIAA1614Q5VZ46 1190 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 WDR59Q6PJI9 974 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 SLFN11Q7Z7L1 901 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 CLEC14AQ86T13 490 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 KYQ8NBH2 561 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 WDR36Q8NI36 951 aaKnown RBP16.53■□□□□ 0.24
LIG1-205ENST00000593425 PCDH19Q8TAB3 1148 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
LIG1-205ENST00000593425 SIRPGQ9P1W8 387 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 DKK3Q9UBP4 350 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 MFHAS1Q9Y4C4 1052 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 ATMQ13315 3056 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 CCDC187A0A096LP49 1063 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 RASA4BC9J798 803 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 NTN3O00634 580 aaPredicted RBP16.52■□□□□ 0.24
LIG1-205ENST00000593425 CCP110O43303 1012 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 RASA4O43374 803 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 TNFSF15O95150 251 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 EPHB2P29323 1055 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 CLN3Q13286 438 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 CYTH1Q15438 398 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 ALG11Q2TAA5 492 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 WSCD2Q2TBF2 565 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 INO80DQ53TQ3 878 aaPredicted RBP16.52■□□□□ 0.24
LIG1-205ENST00000593425 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.24
LIG1-205ENST00000593425 TRIM72Q6ZMU5 477 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 B3GNT8Q7Z7M8 397 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 HID1Q8IV36 788 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 ARL10Q8N8L6 244 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 WDR48Q8TAF3 677 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 TSACCQ96A04 125 aaPredicted RBP16.52■□□□□ 0.24
LIG1-205ENST00000593425 CCDC74AQ96AQ1 378 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 ADAM22Q9P0K1 906 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 GULP1Q9UBP9 304 aa16.52■□□□□ 0.24
LIG1-205ENST00000593425 HELZ2Q9BYK8 2649 aaKnown RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 SCN8AQ9UQD0 1980 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 K7ENP7 123 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 TOR1BO14657 336 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 CREB3O43889 395 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 C6P13671 934 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 NSFP46459 744 aaKnown RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 HK3P52790 923 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 YBEYP58557 167 aaPredicted RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 SERINC3Q13530 473 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 LRRC14Q15048 493 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 KRT31Q15323 416 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 CLEC16AQ2KHT3 1053 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 EFHC2Q5JST6 749 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 INO80CQ6PI98 192 aaPredicted RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 ENPP7Q6UWV6 458 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 FSTL5Q8N475 847 aaPredicted RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 ARL14Q8N4G2 192 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 C3orf20Q8ND61 904 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 CCDC97Q96F63 343 aaPredicted RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 CPEB1Q9BZB8 566 aaKnown RBP16.51■□□□□ 0.23
LIG1-205ENST00000593425 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 NUP62CLQ9H1M0 184 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 PDFQ9HBH1 243 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 DOLKQ9UPQ8 538 aa16.51■□□□□ 0.23
LIG1-205ENST00000593425 A0A1W2PQM1 296 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 TSPAN11A1L157 253 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 CAPN8A6NHC0 703 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 WASH4PA8MWX3 477 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 J3QKU1 62 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 ITGA2BP08514 1039 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 CTSEP14091 401 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 XPAP23025 273 aaPredicted RBP16.5■□□□□ 0.23
LIG1-205ENST00000593425 PEX5P50542 639 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 BLKP51451 505 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 ELP6Q0PNE2 266 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 NFATC4Q14934 902 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 ELOCQ15369 112 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 UGP2Q16851 508 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 ZSCAN23Q3MJ62 389 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 CDKAL1Q5VV42 579 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 SCYL2Q6P3W7 929 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 MON1BQ7L1V2 547 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 RD3Q7Z3Z2 195 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 ZSWIM9Q86XI8 627 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 PHF13Q86YI8 300 aaPredicted RBP16.5■□□□□ 0.23
LIG1-205ENST00000593425 SDR16C5Q8N3Y7 309 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 LIN37Q96GY3 246 aaPredicted RBP16.5■□□□□ 0.23
LIG1-205ENST00000593425 NCAPGQ9BPX3 1015 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 APOOQ9BUR5 198 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 EPB41L5Q9HCM4 733 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 PCDH12Q9NPG4 1184 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 FZD10Q9ULW2 581 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 SIK3Q9Y2K2 1263 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 OR1A2Q9Y585 309 aa16.5■□□□□ 0.23
LIG1-205ENST00000593425 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 D6RAR5 112 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 RASGRP1O95267 797 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms