RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	RETREG1	Q9H6L5	497 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	EPB41L5	Q9HCM4	733 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	SIRPG	Q9P1W8	387 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	GULP1	Q9UBP9	304 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	ACSL6	Q9UKU0	697 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	COQ6	Q9Y2Z9	468 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	TOR1B	O14657	336 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	INSIG1	O15503	277 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	KDELR3	O43731	214 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	RAMP2	O60895	175 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	WISP1	O95388	367 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	WSCD2	Q2TBF2	565 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	VWA3B	Q502W6	1294 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	RAB11FIP2	Q7L804	512 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	PHLDB2	Q86SQ0	1253 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	SDR16C5	Q8N3Y7	309 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	FSTL5	Q8N475	847 aa	Predicted RBP	18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	GPT2	Q8TD30	523 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	SLC20A1	Q8WUM9	679 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	EDEM3	Q9BZQ6	932 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	TTYH3	Q9C0H2	523 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	DKK3	Q9UBP4	350 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	NOCT	Q9UK39	431 aa	Known RBP	18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	MFHAS1	Q9Y4C4	1052 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	RELN	P78509	3460 aa		18.48	■□□□□ 0.55
CIRBP-238	ENST00000592412	C2CD4B	A6NLJ0	364 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412		F8VZ95	297 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	UCHL3	P15374	230 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	HDAC4	P56524	1084 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	KCNC4	Q03721	635 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	TMEM52B	Q4KMG9	183 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	HSP90AA4P	Q58FG1	418 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	LVRN	Q6Q4G3	990 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	HID1	Q8IV36	788 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	FBXO39	Q8N4B4	442 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	CENPI	Q92674	756 aa	Predicted RBP	18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	TBC1D31	Q96DN5	1066 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	GDAP1L1	Q96MZ0	367 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	GFM1	Q96RP9	751 aa	Known RBP	18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	HPCAL4	Q9UM19	191 aa		18.47	■□□□□ 0.55
CIRBP-238	ENST00000592412	BUB1	O43683	1085 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	CYP1A1	P04798	512 aa	Predicted RBP	18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	RPLP0	P05388	317 aa	Known RBP	18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	PLEK	P08567	350 aa	Predicted RBP	18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	CHRNB2	P17787	502 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	MMP8	P22894	467 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCKBR	P32239	447 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	PTPN9	P43378	593 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	PEX5	P50542	639 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	INHBC	P55103	352 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	NFATC3	Q12968	1075 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	EIF3I	Q13347	325 aa	Known RBP	18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	LRRC14	Q15048	493 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	ELOC	Q15369	112 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	SFTPA2	Q8IWL1	248 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	PYROXD2	Q8N2H3	581 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	TUBGCP2	Q9BSJ2	902 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	C1QTNF7	Q9BXJ2	289 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	CPEB1	Q9BZB8	566 aa	Known RBP	18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	LHX3	Q9UBR4	397 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	GPR34	Q9UPC5	381 aa		18.46	■□□□□ 0.55
CIRBP-238	ENST00000592412	SPEN	Q96T58	3664 aa	Known RBP	18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	PIGN	O95427	931 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	ALPI	P09923	528 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	PRKCSH	P14314	528 aa	Predicted RBP	18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	SDC4	P31431	198 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	BLK	P51451	505 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	FMO1	Q01740	532 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	PTP4A2	Q12974	167 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	NFATC4	Q14934	902 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	ENPP7	Q6UWV6	458 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	STRADA	Q7RTN6	431 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	PRICKLE2	Q7Z3G6	844 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	TMPRSS9	Q7Z410	1059 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	MSANTD4	Q8NCY6	345 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	GPR156	Q8NFN8	814 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	EXTL1	Q92935	676 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	FUBP1	Q96AE4	644 aa	Known RBP	18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	PDXP	Q96GD0	296 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	EXOC2	Q96KP1	924 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	APOO	Q9BUR5	198 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	STK33	Q9BYT3	514 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	TRIM4	Q9C037	500 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	LRRN3	Q9H3W5	708 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	DOLK	Q9UPQ8	538 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	OR1A2	Q9Y585	309 aa		18.45	■□□□□ 0.54
CIRBP-238	ENST00000592412	TSPAN11	A1L157	253 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ARHGAP6	O43182	974 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	RASGRP1	O95267	797 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	IGSF6	O95976	241 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	CTSE	P14091	401 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ITGB6	P18564	788 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ITIH1	P19827	911 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ETV5	P41161	510 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	SRP54	P61011	504 aa	Known RBP	18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	RHOA	P61586	193 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	NFKB2	Q00653	900 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZFP36L1	Q07352	338 aa	Known RBP	18.44	■□□□□ 0.54

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