RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PAICSP22234 425 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 LRPAP1P30533 357 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 CRY1Q16526 586 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 FAM71AQ8IYT1 594 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 INSL6Q9Y581 213 aa13.41□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3DA0A087WVF3 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3IA0A087WXS9 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3EA0A087X179 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3KA0A087X1G2 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 A0A0A0MRY4 1105 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3FA6NER0 549 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3LB9A6J9 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 BIRC5O15392 142 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3HP0C7X1 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 CD86P42081 329 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ALDH9A1P49189 494 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 AIF1P55008 147 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 GPM6BQ13491 265 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 POM121L1PQ3SYA9 428 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 INTS11Q5TA45 600 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3GQ6DHY5 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3CQ6IPX1 549 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 BNIPLQ7Z465 357 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 TBC1D3Q8IZP1 549 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 SHC3Q92529 594 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 SPATA13Q96N96 652 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 SNRNP25Q9BV90 132 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 EPB41L4BQ9H329 900 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 WFS1O76024 890 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 GJB6O95452 261 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 RBL1P28749 1068 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 NR1H2P55055 460 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 CCL14Q16627 93 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PCID2Q5JVF3 399 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 NAT16Q8N8M0 369 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 GOLGA2P5Q9HBQ8 144 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 COMMD3-BMI1R4GMX3 469 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 HEATR4Q86WZ0 1026 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ATL1Q8WXF7 558 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ELMO1Q92556 727 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ART4Q93070 314 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 DCUN1D5Q9BTE7 237 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 RIBC2Q9H4K1 309 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 REEP1Q9H902 201 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 ZNHIT2Q9UHR6 403 aa13.4□□□□□ -0.26
SMARCA4-216ENST00000591545 CCNA2P20248 432 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 ATP4AP20648 1035 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 CXCR2P25025 360 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 RPA3P35244 121 aaPredicted RBP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 BNIP2Q12982 314 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 MAMLD1Q13495 774 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF276Q8N554 614 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 NKAPQ8N5F7 415 aaKnown RBP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 PTCD3Q96EY7 689 aaKnown RBP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 SCLYQ96I15 445 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 SEMA3CQ99985 751 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 FAM126AQ9BYI3 521 aaPredicted RBP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 SLITRK2Q9H156 845 aa13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.4□□□□□ -0.27
SMARCA4-216ENST00000591545 AHCYL1O43865 530 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 LTA4HP09960 611 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CCNB1P14635 433 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 FMO4P31512 558 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ARL2P36404 184 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 GPR15P49685 360 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 TNK2Q07912 1038 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 COLGALT2Q8IYK4 626 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ALLCQ8N6M5 410 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 UBE2E3Q969T4 207 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 BTN2A3PQ96KV6 586 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 AGO1Q9UL18 857 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 PLIN4Q96Q06 1357 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 EFCAB10A6NFE3 127 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 OPLAHO14841 1288 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 KCNH1O95259 989 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ITGAVP06756 1048 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CLCN5P51795 746 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 LYPLAL1Q5VWZ2 237 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms