RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GRIN3AQ8TCU5 1115 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 KCNE4Q8WWG9 221 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 KLK6Q92876 244 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 C18orf8Q96DM3 657 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 PDLIM2Q96JY6 352 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 APOLD1Q96LR9 279 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 NPY6RQ99463 290 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 MYOCQ99972 504 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 HEPHQ9BQS7 1158 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 NAA15Q9BXJ9 866 aaKnown RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ZYG11BQ9C0D3 744 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ATP13A1Q9HD20 1204 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 PIGVQ9NUD9 493 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ZNHIT6Q9NWK9 470 aaKnown RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 RAI2Q9Y5P3 530 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 KNTC1P50748 2209 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SPTY2D1-AS1A0A0U1RR47 76 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 FAM170AA1A519 330 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 LGALS16A8MUM7 142 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 K7ESM1 405 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 TOR1BO14657 336 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 TPP1O14773 563 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SNAP91O60641 907 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SRGAP2O75044 1071 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 CSO75390 466 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 CNTN5O94779 1100 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 LSM8O95777 96 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 PAK4O96013 591 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ERBB2P04626 1255 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 CTSLP07711 333 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ADRB3P13945 408 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 NME1P15531 152 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 PON1P27169 355 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 L1CAMP32004 1257 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SERPINH1P50454 418 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 CFHR1Q03591 330 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 VWA3BQ502W6 1294 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ALFQ53S48 1182 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 FIGNQ5HY92 759 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 FAM102AQ5T9C2 384 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 LINGO4Q6UY18 593 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 GCNT7Q6ZNI0 430 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 DPY19L3Q6ZPD9 716 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 TFAP2DQ7Z6R9 452 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ARL14Q8N4G2 192 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 OR52K2Q8NGK3 314 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 IFI44Q8TCB0 444 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 NAT6Q93015 286 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 NT5C3BQ969T7 300 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ISG20Q96AZ6 181 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ARRDC3Q96B67 414 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 ALKBH8Q96BT7 664 aaKnown RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 LENG8Q96PV6 779 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 PSMB7Q99436 277 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 IL12RB2Q99665 862 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 OSBPL1AQ9BXW6 950 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 FZD3Q9NPG1 666 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 CUEDC1Q9NWM3 386 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 UCKL1Q9NWZ5 548 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 IFNKQ9P0W0 207 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SPASTQ9UBP0 616 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 SALL4Q9UJQ4 1053 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 FOXD3Q9UJU5 478 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-226ENST00000591534 DNAJC12Q9UKB3 198 aa9.59□□□□□ -0.87
BRCA1-226ENST00000591534 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.88
BRCA1-226ENST00000591534 IGLV3-10A0A075B6K4 115 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 A0A0D9SEW6 157 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 SLC35F4A4IF30 521 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 TMX2-CTNND1H3BSU7 103 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 K7ERQ8 282 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 KLK10O43240 276 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 AQP9O43315 295 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 TCEA3O75764 348 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ENDOD1O94919 500 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 MPOP05164 745 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 IRAK1P51617 712 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 THOP1P52888 689 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 COPB1P53618 953 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 CLDN2P57739 230 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 GNA12Q03113 381 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 UBXN1Q04323 297 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 RAD51Q06609 339 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 PDE1CQ14123 709 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 NR1I3Q14994 352 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 KRT31Q15323 416 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 NR0B2Q15466 257 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 SEL1L3Q68CR1 1132 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 RBM44Q6ZP01 1051 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ARCQ7LC44 396 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 SLC47A2Q86VL8 602 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 RYBPQ8N488 228 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms