RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ITFG1Q8TB96 612 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 DACT3Q96B18 629 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 LIMD1Q9UGP4 676 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 AK5Q9Y6K8 562 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 MBLAC2Q68D91 279 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 ESRP1Q6NXG1 681 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 P3H2Q8IVL5 708 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 HERC6Q8IVU3 1022 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 CLYBLQ8N0X4 340 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 PRR11Q96HE9 360 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TEPSINQ96N21 525 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 TCF12Q99081 682 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 DMTF1Q9Y222 760 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
SMARCA4-215ENST00000590574 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 AKR1A1P14550 325 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 ITGALP20701 1170 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 OLIG2Q13516 323 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 HECTD2Q5U5R9 776 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM171A1Q5VUB5 890 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 TREML1Q86YW5 311 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 VPS33AQ96AX1 596 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM120BQ96EK7 910 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 SH3GL1Q99961 368 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 USP29Q9HBJ7 922 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM105AQ9NUU6 356 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 RSL24D1Q9UHA3 163 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 H7C4K7 107 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 AZIN1O14977 448 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 PPP3CCP48454 512 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 GALNT3Q14435 633 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 GLMNQ92990 594 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 DNAJB4Q9UDY4 337 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 AOC1P19801 751 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 ARHGEF7Q14155 803 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 INTS6LQ5JSJ4 861 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 TAGAPQ8N103 731 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 CNTD1Q8N815 330 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 PCED1BQ96HM7 432 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 CIB1Q99828 191 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 UXTQ9UBK9 157 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 UBA2Q9UBT2 640 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 FBXW11Q9UKB1 542 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 SLC13A4Q9UKG4 626 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 DDX60LQ5H9U9 1706 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 A0A0G2JLL6 359 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 DHRS12A0PJE2 317 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 YJEFN3A6XGL0 299 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 DDX39BQ13838 428 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 BRMS1LQ5PSV4 323 aa17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 PRRT2Q7Z6L0 340 aaPredicted RBP17.23■□□□□ 0.35
SMARCA4-215ENST00000590574 TREHO43280 583 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 AMHP03971 560 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 DAB2P98082 770 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 DPYSQ14117 519 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 PPM1LQ5SGD2 360 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 STXBP5Q5T5C0 1151 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 MILR1Q7Z6M3 343 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 MICU2Q8IYU8 434 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 BTBD9Q96Q07 612 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 SIRPGQ9P1W8 387 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 TCAF1Q9Y4C2 921 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 BCL10O95999 233 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 SMPD1P17405 629 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 RPL9P32969 192 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 PPP1R15BQ5SWA1 713 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 CLEC6AQ6EIG7 209 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 A0A0J9YYE9 177 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 MBL2P11226 248 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 CCT8P50990 548 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 IL2P60568 153 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 IL5RAQ01344 420 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 FAM187BQ17R55 369 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 LDB1Q86U70 411 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 ZNF276Q8N554 614 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 LPGAT1Q92604 370 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 MIPEPQ99797 713 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 C1orf21Q9H246 121 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 RAD51BO15315 384 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 HNRNPRO43390 633 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 CCNCP24863 283 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 DAOAP59103 153 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 PCLAFQ15004 111 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 PSMD5Q16401 504 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 FRMD7Q6ZUT3 714 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 OR52B2Q96RD2 323 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 PCDHB8Q9UN66 801 aa17.22■□□□□ 0.35
SMARCA4-215ENST00000590574 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms