RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LRRD1A4D1F6 860 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 POM121BA6NF01 834 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 A6NNZ2 444 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 MUSKO15146 869 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 SPINT1O43278 529 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 TNFSF14O43557 240 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 SDC3O75056 442 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 TRIM16O95361 564 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 PRKCGP05129 697 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 ATXN1LP0C7T5 689 aaKnown RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 POLR2LP62875 67 aaKnown RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 SPA17Q15506 151 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 TMEM52BQ4KMG9 183 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 ZNF542PQ5EBM4 170 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 BRAT1Q6PJG6 821 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 GCNT7Q6ZNI0 430 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 ABI3BPQ7Z7G0 1075 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 SLCO6A1Q86UG4 719 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 GAS2L3Q86XJ1 694 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 DCP2Q8IU60 420 aaKnown RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 PDCD6IPQ8WUM4 868 aaKnown RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 RFFLQ8WZ73 363 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 RAPGEF5Q92565 580 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 LENG8Q96PV6 779 aaPredicted RBP12.19□□□□□ -0.46
TPM4-212ENST00000590180 SCNM1Q9BWG6 230 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 C1QTNF7Q9BXJ2 289 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 FTSJ1Q9UET6 329 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 PCDHGC4Q9Y5F7 938 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 KNTC1P50748 2209 aa12.19□□□□□ -0.46
TPM4-212ENST00000590180 CEP295Q9C0D2 2601 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 A8MX80 341 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 NEBLO76041 1014 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 MTA2O94776 668 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 PEX11BO96011 259 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 EPHA8P29322 1005 aaPredicted RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 HSPA9P38646 679 aaKnown RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 MMP13P45452 471 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 RABIFP47224 123 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 MAXP61244 160 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 AP1S1P61966 158 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 SHC2P98077 582 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 NCBP2-AS2Q69YL0 99 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 GLRX5Q86SX6 157 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 CCNYQ8ND76 341 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 CENPTQ96BT3 561 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 KLF6Q99612 283 aaPredicted RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 ZNF670Q9BS34 389 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 NOD2Q9HC29 1040 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 NT5MQ9NPB1 228 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 ATP8A1Q9Y2Q0 1164 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 COQ6Q9Y2Z9 468 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 PCDHA13Q9Y5I0 950 aa12.18□□□□□ -0.46
TPM4-212ENST00000590180 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
TPM4-212ENST00000590180 TMEM131Q92545 1883 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 TSPAN11A1L157 253 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 SPOPO43791 374 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 MFSD11O43934 449 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 MX2P20592 715 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 COMTP21964 271 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 SLC1A1P43005 524 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 LIG3P49916 1009 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 THOP1P52888 689 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 GBE1Q04446 702 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 GALNT2Q10471 571 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 LRRC14Q15048 493 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 IFI16Q16666 785 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 HS1BP3Q53T59 392 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 TIGD7Q6NT04 549 aaPredicted RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 KYAT3Q6YP21 454 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 ZSWIM9Q86XI8 627 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 CCDC170Q8IYT3 715 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM4-212ENST00000590180 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 DENND6BQ8NEG7 585 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 BAHD1Q8TBE0 780 aaPredicted RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 LRRN4Q8WUT4 740 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 ADAMTS14Q8WXS8 1223 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 CNDP2Q96KP4 475 aaKnown RBP12.17□□□□□ -0.46
TPM4-212ENST00000590180 NSMCE3Q96MG7 304 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 RNF157Q96PX1 679 aa12.17□□□□□ -0.46
TPM4-212ENST00000590180 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms